Transcription Factor
| Accessions: | G5ECF7 (JASPAR 2024) |
| Names: | Erythroid-Like Transcription factor family, G5ECF7_CAEEL, GATA transcription factor ELT-3, GATA-type domain-containing protein |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | G5ECF7 |
| Length: | 226 |
| Pfam Domains: | 153-186 GATA zinc finger |
| Sequence: (in bold interface residues) | 1 MKDSQLSVKPAAYYCSPTMNDYRVEKVANTLLDPYVQLDQPTYADFTNAQVLNHQQEMLQ 60 61 MNFPTPLSTSYMNTAQVTQTHQMPFNIFELNLSNFATFQPACDTPLPLLNSSPTHPYTTM 120 121 SNFTPPPQDPLVAEPKPMKKRMAAVQCHQNSICSNCKTRETTLWRRNGEGGVECNACNLY 180 181 FRKNNRKRPLSLRKDGIMKRNRRPRNESPNSAIRNTHQRHGHAAAC |
| Interface Residues: | 162, 163, 165, 175, 179, 180, 183, 200, 202, 203 |
| 3D-footprint Homologues: | 1gat_A, 3dfx_B, 3vd6_C, 4gat_A |
| Binding Motifs: | MA0542.1 TcTTATCA |
| Binding Sites: | MA0542.1.1 MA0542.1.10 MA0542.1.11 MA0542.1.12 MA0542.1.13 MA0542.1.14 MA0542.1.15 MA0542.1.16 MA0542.1.17 MA0542.1.18 MA0542.1.19 MA0542.1.2 MA0542.1.20 MA0542.1.3 MA0542.1.4 MA0542.1.5 MA0542.1.6 MA0542.1.7 MA0542.1.8 MA0542.1.9 |
| Publications: | Budovskaya Y.V, Wu K, Southworth L.K, Jiang M, Tedesco P, Johnson T.E, Kim S.K. An elt-3/elt-5/elt-6 GATA transcription circuit guides aging in C. elegans. Cell 134:291-303 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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