Transcription Factor
Accessions: | phol (FlyZincFinger 1.0 ) |
Names: | CG3445 |
Organisms: | Drosophila melanogaster |
Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
Notes: | family:Cys2His2 zinc finger |
Length: | 128 |
Pfam Domains: | 3-27 C2H2-type zinc finger 20-42 Zinc-finger double domain 32-54 C2H2-type zinc finger 32-54 Zinc finger, C2H2 type 47-72 Zinc-finger double domain 60-84 C2H2-type zinc finger 60-84 Zinc finger, C2H2 type 76-102 Zinc-finger double domain 90-114 C2H2-type zinc finger 90-114 Zinc finger, C2H2 type |
Sequence: (in bold interface residues) | 1 PKFRCTHRGCNKEFRNHSAMRKHMHTHGPRGHVCNVCGKSFVESSKLKRHQLVHTGEKPF 60 61 ECTFEGCGKRFSLDFNLRTHVRIHTGDRPYHCPIDGCSKCFAQSTNLKSHMLTHTKPKRK 120 121 WPRAPQVS |
Interface Residues: | 16, 17, 18, 19, 21, 22, 23, 24, 25, 42, 43, 44, 45, 46, 48, 49, 51, 54, 68, 69, 70, 71, 72, 73, 74, 75, 76, 78, 79, 80, 83, 102, 103, 104, 105, 106, 107, 108, 109, 110 |
3D-footprint Homologues: | 1tf6_A, 5k5l_F, 6ml4_A, 5v3j_F, 8gn3_A, 5yel_A, 5ei9_F, 6wmi_A, 7eyi_G, 2i13_A, 6e94_A, 7ysf_A, 2jpa_A, 1ubd_C, 7w1m_H, 8ssu_A, 5kkq_D, 8ssq_A, 6jnm_A, 8cuc_F, 7y3l_A, 7n5w_A, 1tf3_A, 5und_A, 4x9j_A, 1mey_C, 6blw_A, 2drp_D, 6u9q_A, 2kmk_A, 7txc_E, 5kl3_A, 2gli_A, 5k5i_A, 8h9h_G, 7y3m_I, 2lt7_A, 6a57_A, 4gnx_Z, 3uk3_C, 1llm_D, 2wbs_A, 1f2i_J, 1g2f_F, 5yj3_D, 4m9v_C |
Binding Motifs: | phol_SANGER_5_FBgn0035997 MAAdATGGCG phol_SOLEXA_5_FBgn0035997 ammAArATGGCGgmy |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.