Transcription Factor
Accessions: | A7RNB5 (JASPAR 2024) |
Names: | A7RNB5_NEMVE |
Organisms: | Nematostella vectensis |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Uniprot: | A7RNB5 |
Length: | 156 |
Pfam Domains: | 2-75 Pou domain - N-terminal to homeobox domain 94-150 Homeobox domain |
Sequence: (in bold interface residues) | 1 MNPRELEWFAERFKQRRIKLGVTQADVGSALAHLKIPGVGSLSQSTICRFESLTLSHNNM 60 61 MALKPVLTAWLEEAEKAYKTKQCNSAFLPNSDKKRKRTSIGAAEKRSLEAYFAMNPRPSS 120 121 DKIASIAEKLDLSKNVVRVWFCNQRQKKKRMKFSVH |
Interface Residues: | 24, 25, 43, 44, 45, 46, 48, 49, 55, 59, 89, 90, 91, 92, 93, 94, 95, 96, 97, 135, 136, 138, 139, 142, 143, 146, 147, 150 |
3D-footprint Homologues: | 3l1p_A, 7u0g_M, 3cro_R, 3d1n_M, 1o4x_A, 8g87_X, 1e3o_C, 7xrc_C, 2xsd_C, 1au7_A, 1mey_C, 3a01_E, 1ig7_A, 1puf_A, 6a8r_A, 3cmy_A, 2h1k_B, 1nk2_P, 1fjl_B, 5zfz_A, 2lkx_A, 3lnq_A, 1zq3_P, 2ld5_A, 5zjt_E, 2d5v_B, 1b72_A, 5hod_A, 2r5y_A, 1puf_B, 2hdd_A, 7psx_B, 5jlw_D, 7q3o_C, 1le8_A, 4cyc_A, 1jgg_B, 4qtr_D, 1mnm_C, 1k61_B, 6es3_K, 4xrs_G, 3rkq_B, 5flv_I |
Binding Motifs: | UN0273.1 hTAATTAATd |
Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.