Transcription Factor
| Accessions: | T18878 (AthalianaCistrome v4_May2016), Q9M0F8 (JASPAR 2024) |
| Names: | ANAC075, AT4G29230, T18878;, NAC domain-containing protein 75, NAC75_ARATH |
| Organisms: | Arabidopsis thaliana |
| Libraries: | AthalianaCistrome v4_May2016 1, JASPAR 2024 2 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: DAP-seq, family:NAC |
| Length: | 498 |
| Pfam Domains: | 48-196 No apical meristem (NAM) protein |
| Sequence: (in bold interface residues) | 1 MNKSNPAGSVTGSDIIDAKIEEHQLCGSKKCPSCGHKLEGKPQDWVGLPAGVKFDPTDQE 60 61 LIEHLEAKVLAKDFKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA 120 121 YTTGTRKRRKIQTECDNNLQGSSSSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK 180 181 NRKPEKTNWVMHQYHLGTHEEEKEGELVVSKIFYQTQPRQCNWSSSTSSLNAIGGGGGEA 240 241 SSGGGGGEYHMRRDSGTTSGGSCSSSREIINVNPPNRSDEIGGVGGGVMAVAAAAAAVAA 300 301 GLPSYAMDQLSFVPFMKSFDEVARRETPQTGHATCEDVMAEQHRHRHQPSSSTSHHMAHD 360 361 HHHHHHQQQQQRHHAFNISQPTHPISTIISPSTSLHHASINILDDNPYHVHRILLPNENY 420 421 QTQQQLRQEGEEEHNDGKMGGRSASGLEELIMGCTSSTTHHDVKDGSSSMGNQQEAEWLK 480 481 YSTFWPAPDSSDNQDHHG |
| Interface Residues: | 121, 126, 137, 151, 153, 155, 175, 181, 182, 183, 186 |
| 3D-footprint Homologues: | 7xp3_B, 3swp_A |
| Binding Motifs: | M0685 ArCkTgwwgawsAAG MA2035.1 / UN0347.1 waaGwAgCTTGtwswacAAGcTwy MA2035.2 GwAgCTTGtwswacAAGcTw |
| Binding Sites: | UN0347.1.9 UN0347.1.10 UN0347.1.3 UN0347.1.4 MA2035.1.1 / UN0347.1.1 UN0347.1.11 UN0347.1.12 UN0347.1.13 UN0347.1.14 UN0347.1.15 MA2035.1.3 / UN0347.1.16 MA2035.1.4 / UN0347.1.17 UN0347.1.18 UN0347.1.19 UN0347.1.2 UN0347.1.20 UN0347.1.5 MA2035.1.2 / UN0347.1.6 UN0347.1.7 UN0347.1.8 MA2035.1.6 MA2035.1.10 MA2035.1.11 MA2035.1.12 MA2035.1.13 MA2035.1.14 MA2035.1.15 MA2035.1.16 MA2035.1.17 MA2035.1.18 MA2035.1.19 MA2035.1.20 MA2035.1.5 MA2035.1.7 MA2035.1.8 MA2035.1.9 MA2035.2.1 MA2035.2.10 MA2035.2.11 / MA2035.2.9 MA2035.2.12 MA2035.2.13 MA2035.2.14 MA2035.2.15 MA2035.2.16 MA2035.2.17 MA2035.2.18 MA2035.2.19 MA2035.2.2 MA2035.2.20 MA2035.2.3 MA2035.2.4 MA2035.2.5 MA2035.2.6 MA2035.2.7 MA2035.2.8 |
| Publications: | Zhong R, Lee C, Ye ZH. Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Mol Plant 3:1087-103 (2010). [Pubmed] |
| Related annotations: | PaperBLAST |
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