Transcription Factor
| Accessions: | T140435_1.02 (CISBP 1.02) |
| Names: | AAH72195, T140435_1.02; |
| Organisms: | Xenopus laevis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:SAND |
| Length: | 502 |
| Pfam Domains: | 79-155 SAND domain |
| Sequence: (in bold interface residues) | 1 MANAEVTVPMGDVVVIPSDCIEGEDPEDTKTQVILQLQPIPHGIYGDMSDTNAAVVSLET 60 61 HTLKMGDTLDGGTVELSEDIDIAYPITCGDSKAVLLWKKFVCPGINVKCVKFNDQLISPK 120 121 HFVHLAGKSTLKDWKRAIRLGGTMLRKMMDTGQIDFYQHDQVCTNTCRSTKFDLLINSAR 180 181 APVPGQGTIVQTPSTTEGSLSSVTVSEQTVEDTTVEWGPGLTATLQMNREEMTKEGEEIS 240 241 EETLLFWKGISDVGLMDEVINKIHNEIEELLNGVQQRAGQIPFQVSDATALNNVAHSFGL 300 301 LDSVKKVLEQKKNQTEQSEEQYHYALAELGRQLEEQKKQEGSKSPLLQNVVLMPVSAQKP 360 361 PKRPRLQRPVSAGSINNPSSQPHYTVLSPLTLASIGQQFSLGGVRYATLLGKAGSGDTLA 420 421 VLTTDMQESGELTGVMSPVELVAMDTGLGQDGVGEEGQTIIQIDPAPDPEGGSKVMELGD 480 481 GKVLGVNPDGIHNVEIVVLEDD |
| Interface Residues: | 48, 50, 52, 53, 57, 59, 79, 81, 83 |
| 3D-footprint Homologues: | 1lwt_A |
| Binding Motifs: | M1558_1.02 gkACGTmr |
| Related annotations: | PaperBLAST |
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