Transcription Factor
Accessions: | T016917_1.02 (CISBP 1.02) |
Names: | Hey, T016917_1.02; |
Organisms: | Drosophila melanogaster |
Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
Notes: | experiment type:B1H, family:bHLH |
Length: | 425 |
Pfam Domains: | 106-156 Helix-loop-helix DNA-binding domain 176-211 Hairy Orange |
Sequence: (in bold interface residues) | 1 MDHNMHVNAPSLHHWGYAAGPGVVMPGATATTPQSHWVPPPQSHHSAHSNHSHGHSQGHS 60 61 HGIGSLKRTLSESDCDDLYSEESSKEQISPSEPGSCQLMSRKKRRGVIEKKRRDRINSSL 120 121 TELKRLVPSAYEKQGSAKLEKAEILQLTVEHLKSLQSKTLDSLSYDPQRVAMDYHIIGFR 180 181 ECAAEVARYLVTIEGMDIQDPLRLRLMSHLQYFVQQRELSAKSCASPGGWSPAAPSSSGY 240 241 QPNCAAAPYQSYAAPANPGAYVSSYPTLSASPSQQAQQLGGRTSVSRTSGSAVTESLPSH 300 301 DLHSDSSSQQQQQQQQQQQQQQQHQQQQHQQQQQRTQTTPQPTQQQHYTHDHSAVHSEQQ 360 361 VPTYIELTNSNRPAAIGSDSLSYSAAPQYPVSGLPGQDYNNSSVLQYATPNGAKPYRPWG 420 421 AEMAY |
Interface Residues: | 102, 105, 106, 108, 109, 112, 113, 139, 141 |
3D-footprint Homologues: | 7z5k_B, 5sy7_B, 4h10_B, 8osl_O, 5i50_B, 7f2f_B, 7ssa_L, 6g1l_A, 2ql2_D, 5eyo_A, 1am9_A, 7xi3_A, 4h10_A, 1an4_A, 7d8t_A, 5v0l_A, 4zpk_A, 1a0a_B, 8osl_P, 2ypa_A, 5nj8_D, 5gnj_I, 5nj8_C, 7xhv_B, 7xi3_B, 5v0l_B |
Binding Motifs: | M5006_1.02 YmrsYGRCACGTGhCvM |
Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.