Transcription Factor

						

			
Accessions: AGP1 (Athamap 20091028)

			
Names: AGP1
Organisms: Nicotiana tabacum
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 343
Pfam Domains:   243-276 GATA zinc finger
Sequence: 
(in bold interface residues)		   1 MGSNLVDEIDCGSFFDHIDDLIEFPLENEGAGLSSTDCKDFPTIWNDPLPDSDSLFSGSH   60
  61 RNSASDFSAELSVPYEDIVQLEWLSAFVEDSFSGGGLTLGKDNFPLNKETSEAKFQTSSP  120
 121 VSVLESSSSSSSSSCSVEKTVPLSSPCHRGPQRARSKRPRPATFNPAPAIQLISPTSSFT  180
 181 EIPQPFVAPKITSESENFAESPMKKILKPAVAEQKTKKKLKLSFPSSLVKTNQNPVAQTI  240
 241 RKCQHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPAIHSNSHKK  300
 301 VIEMRTKVVPDNNATIARTAPPATVTQPEFNPSNEDSVEEENK
Interface Residues: 252, 253, 255, 266, 270, 271, 277
3D-footprint Homologues: 1gat_A, 4hc9_A, 3dfx_B, 3vd6_C, 4gat_A
Binding Motifs: AGP1 hcAGATCTAb
			
Publications: Sugimoto K., Takeda S., Hirochika H. Transcriptional activation mediated by binding of a plant GATA-type zinc finger protein AGP1 to the AG-motif (AGATCCAA) of the wound-inducible Myb gene NtMyb2.. Plant J. 36:550-564 (2003). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.