Transcription Factor
| Accessions: | P23803 (JASPAR 2024) |
| Names: | ODD_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | P23803 |
| Length: | 392 |
| Pfam Domains: | 220-242 Zinc finger, C2H2 type 220-242 C2H2-type zinc finger 220-237 C2H2-type zinc finger 234-258 Zinc-finger double domain 248-270 Zinc finger, C2H2 type 248-270 C2H2-type zinc finger 248-267 C2H2-type zinc finger 262-285 Zinc-finger double domain 276-286 C2H2-type zinc finger 276-298 Zinc finger, C2H2 type 292-314 Zinc-finger double domain 303-326 C2H2-type zinc finger 304-326 C2H2-type zinc finger 304-326 Zinc finger, C2H2 type 305-326 Zinc-finger of C2H2 type |
| Sequence: (in bold interface residues) | 1 MSSTSASPISNITVDDELNLSREQDFAEEDFIVIKEERETSLSPMLTPPHTPTEEPLRRV 60 61 HPAISEEAVATQLHMRHMAHYQQQQQQQQQQQQHRLWLQMQQQQQQHQAPQQYPVYPTAS 120 121 ADPVAVHQQLMNHWIRNAAIYQQQQQQQQHPHHHHHHGHPHHPHPHPHHVRPYPAGLHSL 180 181 HAAVMGRHFGAMPTLKLGGAGGASGVPSGATGSSRPKKQFICKYCNRQFTKSYNLLIHER 240 241 THTDERPYSCDICGKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLE 300 301 EGPHKCPICQRSFNQRANLKSHLQSHSEQSTKEVVVTTSPATSHSVPNQALSSPQPENLA 360 361 QHLPVLDLSSSSSSSEKPKRMLGFTIDEIMSR |
| Interface Residues: | 220, 230, 231, 232, 233, 234, 236, 237, 238, 239, 240, 243, 255, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 269, 286, 287, 288, 289, 290, 291, 292, 293, 296, 301, 314, 315, 316, 317, 318, 320, 321 |
| 3D-footprint Homologues: | 2kmk_A, 8cuc_F, 7y3l_A, 7n5w_A, 3uk3_C, 6jnm_A, 5v3j_F, 2gli_A, 1llm_D, 6blw_A, 5kkq_D, 7w1m_H, 6ml4_A, 4x9j_A, 2i13_A, 5kl3_A, 8ssu_A, 1f2i_J, 5ei9_F, 8gn3_A, 5und_A, 2drp_D, 1g2f_F, 5k5i_A, 1tf6_A, 7eyi_G, 8h9h_G, 4m9v_C, 7ysf_A, 6wmi_A, 6e94_A, 7y3m_I, 6a57_A, 2jpa_A, 1ubd_C, 1tf3_A, 8ssq_A, 5yel_A, 1mey_C, 2wbs_A, 5yj3_D, 6u9q_A, 2lt7_A, 7txc_E, 1yuj_A, 6rnr_A, 6fl1_A |
| Binding Motifs: | MA0454.1 mmCAGTAGCAv |
| Binding Sites: | MA0454.1.1 MA0454.1.10 MA0454.1.11 MA0454.1.12 MA0454.1.13 MA0454.1.14 MA0454.1.15 MA0454.1.16 MA0454.1.17 MA0454.1.18 MA0454.1.19 MA0454.1.2 MA0454.1.20 MA0454.1.3 MA0454.1.4 MA0454.1.5 MA0454.1.6 MA0454.1.7 MA0454.1.8 MA0454.1.9 |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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