Transcription Factor
Accessions: | Q9LIE5 (JASPAR 2024) |
Names: | FHY3_ARATH |
Organisms: | Arabidopsis thaliana |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Uniprot: | Q9LIE5 |
Length: | 839 |
Pfam Domains: | 84-186 FAR1 DNA-binding domain 290-379 MULE transposase domain |
Sequence: (in bold interface residues) | 1 MDIDLRLHSGDLCKGDDEDRGLDNVLHNEEDMDIGKIEDVSVEVNTDDSVGMGVPTGELV 60 61 EYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSR 120 121 YGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREH 180 181 NHELLPAQAVSEQTRKIYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVETGDFKILLD 240 241 FLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPL 300 301 AIFVGVNQHYQYMVLGCALISDESAATYSWLMETWLRAIGGQAPKVLITELDVVMNSIVP 360 361 EIFPNTRHCLFLWHVLMKVSENLGQVVKQHDNFMPKFEKCIYKSGKDEDFARKWYKNLAR 420 421 FGLKDDQWMISLYEDRKKWAPTYMTDVLLAGMSTSQRADSINAFFDKYMHKKTSVQEFVK 480 481 VYDTVLQDRCEEEAKADSEMWNKQPAMKSPSPFEKSVSEVYTPAVFKKFQIEVLGAIACS 540 541 PREENRDATCSTFRVQDFENNQDFMVTWNQTKAEVSCICRLFEYKGYLCRHTLNVLQCCH 600 601 LSSIPSQYILKRWTKDAKSRHFSGEPQQLQTRLLRYNDLCERALKLNEEASLSQESYNIA 660 661 FLAIEGAIGNCAGINTSGRSLPDVVTSPTQGLISVEEDNHSRSAGKTSKKKNPTKKRKVN 720 721 PEQDVMPVAAPESLQQMDKLSPRTVGIESYYGTQQSVQGMVQLNLMGPTRDNFYGNQQTM 780 781 QGLRQLNSIAPSYDSYYGPQQGIHGQGVDFFRPANFSYDIRDDPNVRTTQLHEDASRHS |
Interface Residues: | 133, 155, 156, 158, 159, 160, 178 |
3D-footprint Homologues: | 2ko0_A |
Binding Motifs: | MA0557.1 ywCACGCGCThw MA0557.2 CACGCGCT |
Publications: | Ouyang X, Li J, Li G, Li B, Chen B, Shen H, Huang X, Mo X, Wan X, Lin R, Li S, Wang H, Deng X.W. Genome-wide binding site analysis of FAR-RED ELONGATED HYPOCOTYL3 reveals its novel function in Arabidopsis development. The Plant cell 23:2514-35 (2011). [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.