Transcription Factor
| Accessions: | SigW (DBTBS 1.0) |
| Names: | RNA polymerase sigma factor SigW, Sigma-W factor, SigW, SIGW_BACSU |
| Organisms: | Bacillus subtilis |
| Libraries: | DBTBS 1.0 1 1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed] |
| Uniprot: | Q45585 |
| Length: | 187 |
| Pfam Domains: | 7-185 ECF sigma factor 25-89 Sigma-70 region 2 129-180 Sigma-70, region 4 136-182 Sigma-70, region 4 |
| Sequence: (in bold interface residues) | 1 MEMMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNI 60 61 DSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQIVADGVLPEDA 120 121 VVSLELSNTIQQKILKLPDKYRTVIVLKYIDELSLIEIGEILNIPVGTVKTRIHRGREAL 180 181 RKQLRDL |
| Interface Residues: | 55, 59, 63, 64, 66, 67, 70, 71, 72, 74, 75, 76, 79, 119, 120, 137, 155, 168, 170, 171, 174, 175 |
| 3D-footprint Homologues: | 4lup_A, 8c7s_A, 6jhe_A, 2h27_A |
| Binding Motifs: | SigW_1 TGAAACyTTT SigW_2 CGTmTW |
| Binding Sites: | abh_1 divIC_1 pbpE_3 pbpX_1 pspA sigW_2 sppA xpaC ybfO yceC_2 ydbS yeaA yfhL yjbC_2 yjoB yknW_2 yndN yoaF yoaG yobJ yozO yqeZ yqjL_1 yrhH_1 ysdB ythP yuaF yvlA_2 ywaC ywbN_1 ywnJ_2 ywrE yxjI yxzE_2 |
| Related annotations: | PaperBLAST |
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