Transcription Factor

Accessions: DLX2_Full (HumanTF2 1.0)
Names: DLX2, DLX2_HUMAN
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Uniprot: Q07687
Notes: Ensembl ID: ENSG00000115844; Construct type: Full length protein used in HT-SELEX with mixed proteins; TF family: Homeodomain; Clone source: Jolma et al. 2013
Length: 329
Pfam Domains: 51-132 Homeobox protein distal-less-like N terminal
153-209 Homeobox domain
Sequence:
(in bold interface residues)
1 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST 60
61 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA 120
121 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP 180
181 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS 240
241 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL 300
301 HPTQTPQPHHHHHHHGGGGAPVSAGTIF*
Interface Residues: 153, 154, 155, 156, 194, 195, 197, 198, 201, 202, 205, 206, 209
3D-footprint Homologues: 1puf_A, 1ig7_A, 5zjt_E, 3cmy_A, 1mnm_C, 6a8r_A, 3d1n_M, 1fjl_B, 5zfz_A, 2h1k_B, 2lkx_A, 1nk2_P, 1zq3_P, 6m3d_C, 7q3o_C, 6es3_K, 2ld5_A, 2hdd_A, 7psx_B, 5hod_A, 3rkq_B, 2r5y_A, 1jgg_B, 2hos_A, 5jlw_D, 4cyc_A, 4xrs_G, 4j19_B, 3a01_E, 1b72_A, 5flv_I, 3lnq_A, 1e3o_C, 2xsd_C, 1au7_A, 7xrc_C, 1le8_A, 8g87_X, 4qtr_D, 1du0_A, 1puf_B, 4xrm_B, 1k61_B, 3l1p_A, 1o4x_A
Binding Motifs: ERF_DLX2_1 rsmGGAwrtsrvymaTTA
ERF_DLX2_2 rsmGGAwrtsrvymaTTa
ETV2_DLX2_1 acCGGAWrTwrmbyAATTR
ETV2_DLX2_2 rsMGGAAryvvsyaATTA
ETV5_DLX2 rsCGGAwrtvrsymATTA
FLI1_DLX2_1 rsMGGAAryaaTtA
FLI1_DLX2_2 rvmGGAArtsvsyaaTtar
FLI1_DLX2_2_3 ACCGGAArTgrsyAATTA
GCM2_DLX2 rTrcGGGywadwtAATtr
MEIS1_DLX2 tGACArswTAATtr
MGA_DLX2_1 rGGTGhTAATTr
MGA_DLX2_2 syAATTAwaGGTGyGA
POU2F1_DLX2_1 tgAATATkcaTmCAcTAATTG
POU2F1_DLX2_2 tGmATATkCahwmkTAATTr
POU2F1_DLX2_2_3 wTwTGCRwAkyYAATtr
TEAD4_DLX2_1 rmATwcyargyaATTA
TEAD4_DLX2_2 rCATwCyacwryAATTA
TEAD4_DLX2_2_3 rmATwcywyssTAATtr
TEAD4_DLX2_2_3_4 ggwATGtTAATkr
TEAD4_DLX2_2_3_4_5 crCATwCCryvmTAATtrc
TEAD4_DLX2_2_3_4_5_6 crCATwCCrvsyaATTA
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Related annotations: PaperBLAST

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