Transcription Factor
| Accessions: | MYF6 (SMILE-seq 1.0) |
| Names: | bHLHc4, Class C basic helix-loop-helix protein 4, Muscle-specific regulatory factor 4, Myf-6, MYF6, MYF6_HUMAN, Myogenic factor 6 |
| Organisms: | Homo sapiens |
| Libraries: | SMILE-seq 1.0 1 1 Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed] |
| Uniprot: | P23409 |
| Notes: | TF family: bHLH |
| Length: | 241 |
| Pfam Domains: | 3-93 Myogenic Basic domain 94-145 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MMMDLFETGSYFFYLDGENVTLQPLEVAEGSPLYPGSDGTLSPCQDQMPPEAGSDSSGEE 60 61 HVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRT 120 121 VANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQELGVDPFSYRPKQENLEGADFL 180 181 RTCSSQWPSVSDHSRGLVITAKEGGASIDSSASSSLRCLSSIVDSISSEERKLPCVEEVV 240 241 E |
| Interface Residues: | 95, 98, 99, 101, 102, 103, 105, 106, 122, 126, 127, 130, 136 |
| 3D-footprint Homologues: | 7z5k_B, 2ypa_A, 6g1l_A, 6od3_F, 5i50_B, 1am9_A, 2ypa_B, 2ql2_A, 2ql2_D, 7d8t_A, 5gnj_I, 5xut_A |
| Binding Motifs: | MYF6 yaACAgkTGwy |
| Publications: | Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.