Transcription Factor

						

			
Accessions: ab (FlyZincFinger 1.0 )

			
Names: CG4807
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Notes: family:Cys2His2 zinc finger
Length: 98
Pfam Domains:     16-38 C2H2 type zinc-finger (2 copies)
    17-39 C2H2-type zinc finger
    18-36 Zinc finger, C2H2 type
    38-73 C2H2 type zinc-finger (2 copies)
    45-68 C2H2-type zinc finger
    45-68 Zinc finger, C2H2 type
Sequence: 
(in bold interface residues)		   1 VSRRSLEMRVRATDPRPCPKCGKIYRSAHTLRTHLEDKHTVCPGYRCVLCGTVAKSRNSL   60
  61 HSHMSRQHRGISTKDLPVLPMPSAFDPELASRLLAKAG
Interface Residues: 6, 9, 12, 13, 26, 27, 28, 29, 30, 31, 33, 34, 55, 56, 57, 58, 59, 61, 62, 65, 66, 91
3D-footprint Homologues: 5yel_A, 1yuj_A, 3uk3_C, 8cuc_F, 7y3l_A, 7n5w_A, 2kmk_A, 6u9q_A, 5k5l_F, 8ssq_A, 7w1m_H, 5kkq_D, 2i13_A, 8ssu_A, 4m9v_C, 8gn3_A, 5und_A, 6ml4_A, 5k5i_A, 1mey_C, 2lt7_A, 7ysf_A, 7eyi_G, 8h9h_G, 6e94_A, 7y3m_I, 5yj3_D, 7txc_E
Binding Motifs: ab_SANGER_10_FBgn0259750 bwsrCCAGGwmCymtyhwrmv
ab_SOLEXA_5_FBgn0259750 mmcchsrCCAGGwMCymwymmammaa
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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