Transcription Factor
| Accessions: | T06956 (AthalianaCistrome v4_May2016) |
| Names: | ABF2, AT1G45249, T06956; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | AthalianaCistrome v4_May2016 1 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: DAP-seq, family:bZIP |
| Length: | 427 |
| Pfam Domains: | 337-363 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 MDGSMNLGNEPPGDGGGGGGLTRQGSIYSLTFDEFQSSVGKDFGSMNMDELLKNIWSAEE 60 61 TQAMASGVVPVLGGGQEGLQLQRQGSLTLPRTLSQKTVDQVWKDLSKVGSSGVGGSNLSQ 120 121 VAQAQSQSQSQRQQTLGEVTLEEFLVRAGVVREEAQVAARAQIAENNKGGYFGNDANTGF 180 181 SVEFQQPSPRVVAAGVMGNLGAETANSLQVQGSSLPLNVNGARTTYQQSQQQQPIMPKQP 240 241 GFGYGTQMGQLNSPGIRGGGLVGLGDQSLTNNVGFVQGASAAIPGALGVGAVSPVTPLSS 300 301 EGIGKSNGDSSSLSPSPYMFNGGVRGRKSGTVEKVVERRQRRMIKNRESAARSRARKQIF 360 361 TADQTIYWNAYTVELEAEVAKLKEENDELQRKQARIMEMQKNQETEMRNLLQGGPKKKLR 420 421 RTESGPW |
| Interface Residues: | 339, 342, 343, 345, 346, 349, 350, 353, 354 |
| 3D-footprint Homologues: | 6mg1_B, 7x5e_E, 1dh3_C |
| Binding Motifs: | M0217 dawwwTGMCACGTswccw |
| Related annotations: | PaperBLAST |
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