Transcription Factor

						

			
Accessions: AtMYB118 (AthaMYB 1.0)

			
Names: AtMYB118, Myb domain protein 118, Myb family transcription factor, PGA37, Probable MYB-like DNA-binding protein
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9LVW4
Length: 438
Pfam Domains:   189-235 Myb-like DNA-binding domain
  192-252 Myb-like DNA-binding domain
  242-283 Myb-like DNA-binding domain
  244-285 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MEFESVFKMHYPYLAAVIYDDSSTLKDFHPSLTDDFSCVHNVHHKPSMPHTYEIPSKETI   60
  61 RGITPSPCTEAFEACFHGTSNDHVFFGMAYTTPPTIEPNVSHVSHDNTMWENDQNQGFIF  120
 121 GTESTLNQAMADSNQFNMPKPLLSANEDTIMNRRQNNQVMIKTEQIKKKNKRFQMRRICK  180
 181 PTKKASIIKGQWTPEEDKLLVQLVDLHGTKKWSQIAKMLQGRVGKQCRERWHNHLRPDIK  240
 241 KDGWTEEEDIILIKAHKEIGNRWAEIARKLPGRTENTIKNHWNATKRRQHSRRTKGKDEI  300
 301 SLSLGSNTLQNYIRSVTYNDDPFMTANANANIGPRNMRGKGKNVMVAVSEYDEGECKYIV  360
 361 DGVNNLGLEDGRIKMPSLAAMSASGSASTSGSASGSGSGVTMEIDEPMTDSWMVMHGCDE  420
 421 VMMNEIALLEMIAHGRL*
Interface Residues: 189, 223, 224, 225, 226, 228, 229, 233, 234, 275, 276, 279, 280, 283, 284, 285
3D-footprint Homologues: 3osg_A, 2kdz_A, 5eyb_B, 7xur_A, 3zqc_A, 1mse_C, 6kks_A
Binding Motifs: AtMYB118_I wwmaGTTr
AtMYB118_II GTwrGTTA
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
AGGTTA
ATTAGTTG
GTCAGTTA
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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