Transcription Factor
| Accessions: | P08970 (JASPAR 2024) |
| Names: | SUHW_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | P08970 |
| Length: | 941 |
| Pfam Domains: | 220-240 C2H2-type zinc finger 220-235 C2H2-type zinc finger 292-309 C2H2-type zinc finger 292-313 Zinc finger, C2H2 type 319-341 C2H2-type zinc finger 348-360 C2H2-type zinc finger 348-368 Zinc finger, C2H2 type 348-368 C2H2-type zinc finger 381-402 Zinc finger, C2H2 type 382-400 Zinc-finger of C2H2 type 382-403 C2H2-type zinc finger 382-402 C2H2-type zinc finger 428-451 Zinc-finger double domain 441-463 C2H2-type zinc finger 441-463 Zinc finger, C2H2 type 442-463 C2H2-type zinc finger 455-479 Zinc-finger double domain 469-491 C2H2-type zinc finger 469-491 C2H2-type zinc finger 469-491 Zinc finger, C2H2 type 484-506 Zinc-finger double domain 496-519 C2H2-type zinc finger 497-519 C2H2-type zinc finger 497-519 Zinc finger, C2H2 type 512-534 Zinc-finger double domain 523-545 C2H2-type zinc finger 523-545 C2H2-type zinc finger 523-545 Zinc finger, C2H2 type 553-573 Zinc finger, C2H2 type 598-619 C2H2-type zinc finger 598-616 C2H2-type zinc finger 598-619 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MSASKEGKEKKGKLLGVENISPPKDKRPATRMKLLNDVGAGEDSEASTTTTTSRTPSNKQ 60 61 EKRGSVAGSRIKILNEEILGTPKTEKRGATKSTAPAASTVKILNEKKTPSATVTAVETTK 120 121 IKTSPSKRKKMEHYVLQAVKSENTKADTTVTVVTEEDDTIDFILADDEEVVPGRIENNNG 180 181 QEIVVTEDDEDLGEDGDEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLE 240 241 FCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDICFCCSESYDTFHLGHINCPDCPKSFK 300 301 TQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHEEQHKSRGKPYACKICGKDFTRS 360 361 YHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKN 420 421 CFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAV 480 481 KEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTHSKTHIRPFPCEQCDEKFKTEKQLER 540 541 HVKTHSRTKRPVFSCAECKRNFRTPALLKEHMDEGKHSPKQQRSSMRSAVKIMERTDCAI 600 601 CDKNFDSSDTLRRHIRTVHECDPDDIFGVEPHPSKRAKKDIESEEVVPVALNTSAGSLIS 660 661 SQTDGNGVVVREFLVDEGDGAAQTITLENETYTILPLDGAIEGEQLTDEAGVKPEAKKEE 720 721 AQVSPVVKKEQRKSLAASLAAAIADNLEESCSEDDFSGEILTEEDIKLKENVGKLIDMLV 780 781 DPPILKKYGWPNAPEETVLCKVIENCGHDLTKGGENYAELDYGSRMREYCKLLFTVVIHN 840 841 DSIKSLLNNFPIDDVIEYVLGDEDQDEGGLDKDNESHSGDEEAVSVTGETKTNEIREKPE 900 901 KKEVSAKSEKKEIVGKAVDKDNSEEVVRENKKKPVGEQEKA |
| Interface Residues: | 301, 304, 307, 311, 330, 332, 333, 336, 359, 360, 361, 362, 364, 365, 369, 378, 390, 391, 392, 393, 394, 397, 423, 424, 425, 426, 427, 429, 430, 432, 433, 434, 436, 441, 451, 452, 453, 454, 455, 457, 458, 459, 479, 480, 481, 482, 483, 484, 485, 486, 487, 490, 507, 508, 509, 510, 511, 513, 514, 534, 535, 536, 537, 540, 564, 566, 567, 570, 579, 581, 583, 584, 586, 590, 606, 607, 608, 610 |
| 3D-footprint Homologues: | 8ssq_A, 7w1m_H, 2drp_D, 8ssu_A, 5v3j_F, 5yel_A, 2i13_A, 6wmi_A, 7n5w_A, 6ml4_A, 2gli_A, 5kkq_D, 7eyi_G, 6e94_A, 7ysf_A, 5und_A, 2jpa_A, 1ubd_C, 2kmk_A, 6jnm_A, 3uk3_C, 8cuc_F, 7y3l_A, 5kl3_A, 2wbs_A, 5ei9_F, 1mey_C, 5k5i_A, 1g2f_F, 6blw_A, 6u9q_A, 4x9j_A, 8h9h_G, 4m9v_C, 1tf3_A, 2lt7_A, 1tf6_A, 7y3m_I, 6a57_A, 1llm_D, 7txc_E, 1f2i_J, 8gn3_A, 5yj3_D |
| Binding Motifs: | MA0533.1 gCcyaAAAGTATGCwAyrmww |
| Binding Sites: | MA0533.1.1 MA0533.1.10 MA0533.1.11 / MA0533.1.12 MA0533.1.13 MA0533.1.14 MA0533.1.15 MA0533.1.16 MA0533.1.17 MA0533.1.18 MA0533.1.19 MA0533.1.2 MA0533.1.20 MA0533.1.3 MA0533.1.4 MA0533.1.5 MA0533.1.6 MA0533.1.7 MA0533.1.8 MA0533.1.9 |
| Publications: | Adryan B, Woerfel G, Birch-Machin I, Gao S, Quick M, Meadows L, Russell S, White R. Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila. Genome biology 8:R167 (2007). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.