Transcription Factor

Accessions: P40764 (JASPAR 2024)
Names: DLX2_MOUSE, Homeobox protein DLX-2, Homeobox protein TES-1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 332
Pfam Domains: 54-134 Homeobox protein distal-less-like N terminal
156-212 Homeobox domain
Sequence:
(in bold interface residues)
1 MTGVFDSLVADMHSTQITASSTYHQHQQPPSGAGAGPGGNSNSSSSNSSLHKPQESPTLP 60
61 VSTATDSSYYTNQQHPAGGGGGGASPYAHMGSYQYHASGLNNVSYSAKSSYDLGYTAAYT 120
121 SYAPYGTSSSPVNNEPDKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYL 180
181 ALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPTEQHPGASASPPCASPPVSA 240
241 PASWDFGAPQRMAGGGPGSGGGGAGSSGSSPSSAASAFLGNYPWYHQASGSASHLQATAP 300
301 LLHPSQTPQAHHHHHHHHHAGGGAPVSAGTIF
Interface Residues: 156, 157, 158, 159, 197, 198, 200, 201, 204, 205, 208, 209, 212
3D-footprint Homologues: 1fjl_B, 5zfz_A, 2h1k_B, 1puf_A, 1ig7_A, 5zjt_E, 3cmy_A, 1mnm_C, 6a8r_A, 3d1n_M, 1nk2_P, 1zq3_P, 6m3d_C, 2lkx_A, 7q3o_C, 6es3_K, 2ld5_A, 2hos_A, 5jlw_D, 4cyc_A, 4xrs_G, 4j19_B, 3a01_E, 1b72_A, 5flv_I, 3lnq_A, 2hdd_A, 7psx_B, 5hod_A, 3rkq_B, 2r5y_A, 1jgg_B, 1e3o_C, 2xsd_C, 1au7_A, 7xrc_C, 1le8_A, 1k61_B, 3l1p_A, 1o4x_A, 8g87_X, 4qtr_D, 1du0_A, 1puf_B, 4xrm_B
Binding Motifs: MA0885.1 syAATTAw
PH0021.1 vrdrYAATTRbhymag
MA0885.2 awGCAATTAGmw
MA0885.3 GCAATTAG
Binding Sites: MA0885.3.20
MA0885.3.8
MA0885.2.1 / MA0885.2.4
MA0885.2.10 / MA0885.2.16
MA0885.2.11 / MA0885.2.19
MA0885.2.12
MA0885.2.13
MA0885.2.14
MA0885.2.15
MA0885.2.16
MA0885.2.17
MA0885.2.18
MA0885.2.19
MA0885.2.2 / MA0885.2.5
MA0885.2.20
MA0885.2.3 / MA0885.2.6
MA0885.2.4 / MA0885.2.8
MA0885.2.10 / MA0885.2.5
MA0885.2.12 / MA0885.2.6
MA0885.2.13 / MA0885.2.7
MA0885.2.14 / MA0885.2.8
MA0885.2.15 / MA0885.2.9
MA0885.2.1
MA0885.2.11
MA0885.2.17
MA0885.2.18
MA0885.2.2
MA0885.2.20
MA0885.2.3
MA0885.2.7
MA0885.2.9
MA0885.3.1
MA0885.3.10
MA0885.3.11
MA0885.3.12 / MA0885.3.13
MA0885.3.14
MA0885.3.15 / MA0885.3.3
MA0885.3.16
MA0885.3.17
MA0885.3.18
MA0885.3.19
MA0885.3.2 / MA0885.3.4
MA0885.3.5
MA0885.3.6
MA0885.3.7 / MA0885.3.9
Publications: Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.