Transcription Factor
| Accessions: | Q22717 (JASPAR 2024) |
| Names: | HLH3_CAEEL |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q22717 |
| Length: | 170 |
| Pfam Domains: | 28-80 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MTASTSSTPSTSTKIPSSSKSSVTKQTKQKRNERERKRVDQVNQGFVLLQERVPKAAGNK 60 61 AKLSKVETLREAARYIQELQKQLGMSSTSFHNSMPADFPTPEQSPVYPQSVCSMMAQTPS 120 121 PSYTSPYYPPPQMMSSNQHDMSSHYYQESSSSSASTSGDHHSFYSHTETY |
| Interface Residues: | 31, 32, 34, 35, 38, 39, 63 |
| 3D-footprint Homologues: | 4h10_B, 8osl_O, 5eyo_A, 2ql2_D, 2ypa_A, 5i50_B, 7z5k_B, 1an4_A, 5gnj_I |
| Binding Motifs: | PL0002.1 mrtrmCACCTGCtaayy |
| Publications: | Grove C.A, De Masi F, Barrasa M.I, Newburger D.E, Alkema M.J, Bulyk M.L, Walhout A.J. A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138:314-27 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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