Transcription Factor
| Accessions: | Q7JN06 (JASPAR 2024) |
| Names: | Boundary element associated factor, Boundary element-associated factor of 32kD, isoform A, Q7JN06_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q7JN06 |
| Length: | 283 |
| Pfam Domains: | 237-272 BESS motif |
| Sequence: (in bold interface residues) | 1 MHVEKKSELRSLLKSGDKRCKLVEPRNTKSCVWRFFNLVQCDDHIEPYACCKTCGDLLSY 60 61 SGKTGTGSLLRHRCLHSSSSNDKTVRITKAKTLREPLRVAKPKIESNVANYLGEAGALPQ 120 121 KWEEYEQNDEISEDIKDIIYSEDPLCYSPIHVMDDEGLDQPEKQVTVLTHSTSPAGGSSR 180 181 PIGVGSGVQATVVASTSSSSSSAKQLKNNLETSIERLTAVSEQLSYIIQQNHEELTKDDD 240 241 YYFALSLVPAMRHLSLSRKMYVRSKIQDILFKESEDSTLAKDE |
| Interface Residues: | 60, 68, 71, 93, 95, 96, 99 |
| 3D-footprint Homologues: | 6e94_A |
| Binding Motifs: | MA0529.1 kcrmarmtATCGATw |
| Binding Sites: | MA0529.1.1 MA0529.1.10 MA0529.1.11 MA0529.1.12 MA0529.1.13 MA0529.1.14 MA0529.1.15 MA0529.1.16 MA0529.1.17 MA0529.1.18 MA0529.1.19 MA0529.1.2 MA0529.1.20 MA0529.1.3 MA0529.1.4 MA0529.1.5 MA0529.1.6 MA0529.1.7 MA0529.1.8 MA0529.1.9 |
| Publications: | Yang J, Ramos E, Corces V.G. The BEAF-32 insulator coordinates genome organization and function during the evolution of Drosophila species. Genome research 22:2199-207 (2012). [Pubmed] |
| Related annotations: | PaperBLAST |
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