Transcription Factor
| Accessions: | P28357 (JASPAR 2024) |
| Names: | Homeobox protein Hox-4.4, Homeobox protein Hox-5.2, Homeobox protein Hox-D9, HXD9_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 339 |
| Pfam Domains: | 1-113 Hox9 activation region 273-329 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MSSSGTLSNYYVDSLIGHEGDEVFAARFGPPGPGTQGRPAGVADGPAAATAEFASCSFAP 60 61 KSSVFSASWSAVAAQPPAAATMSGLYHPYVSPPPLAAAEPGRYVRSWMEPLPGFPGGAGG 120 121 GGGSGGGGGGGPGPVPSPGGPANGRHYGIKPETGAAPAPAAASTSSSSSTSSSSSSKRTE 180 181 CSAARESQGSGGPEFPCNSFLRDKAAAATGNGPGVGIGTGPGAVGSSEPSACSDHPSPGC 240 241 SLKEEEKQPPQPPQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRD 300 301 RRYEVARILNLTERQVKIWFQNRRMKMKKMSKEKCPKGD |
| Interface Residues: | 256, 259, 260, 263, 273, 274, 275, 276, 314, 315, 317, 318, 321, 322, 325, 326, 329 |
| 3D-footprint Homologues: | 5zfz_A, 1ig7_A, 6a8r_A, 2h1k_B, 1puf_A, 1fjl_B, 6m3d_C, 3cmy_A, 1nk2_P, 1zq3_P, 1jgg_B, 3lnq_A, 2lkx_A, 7q3o_C, 2ld5_A, 6es3_K, 2hdd_A, 1b72_A, 5zjt_E, 4cyc_A, 2r5y_A, 1puf_B, 7psx_B, 5hod_A, 2hos_A, 5jlw_D, 4xrs_G, 3a01_E, 3rkq_B, 5flv_I, 1le8_A, 2xsd_C, 1e3o_C, 7xrc_C, 1au7_A, 3d1n_M, 1du0_A, 4qtr_D, 1o4x_A, 1k61_B |
| Binding Motifs: | MA0913.1 gymATwAAaw |
| Publications: | Shanmugam K, Green NC, Rambaldi I, Saragovi HU, Featherstone MS. PBX and MEIS as non-DNA-binding partners in trimeric complexes with HOX proteins. Mol Cell Biol 19:7577-88 (1999). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.