Transcription Factor

Accessions: DegU (DBTBS 1.0)
Names: DegU, DEGU_BACSU, Protease production enhancer protein, Transcriptional regulatory protein DegU
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Uniprot: P13800
Length: 229
Pfam Domains: 6-118 Response regulator receiver domain
164-220 Bacterial regulatory proteins, luxR family
Sequence:
(in bold interface residues)
1 MTKVNIVIIDDHQLFREGVKRILDFEPTFEVVAEGDDGDEAARIVEHYHPDVVIMDINMP 60
61 NVNGVEATKQLVELYPESKVIILSIHDDENYVTHALKTGARGYLLKEMDADTLIEAVKVV 120
121 AEGGSYLHPKVTHNLVNEFRRLATSGVSAHPQHEVYPEIRRPLHILTRRECEVLQMLADG 180
181 KSNRGIGESLFISEKTVKNHVSNILQKMNVNDRTQAVVVAIKNGWVEMR
Interface Residues: 193, 194, 195, 196, 198, 199, 200, 202
3D-footprint Homologues: 7ve5_B, 5w43_B, 8dq1_C, 1je8_F, 6ide_A, 1zlk_A, 4wuh_B
Binding Motifs: DegU_1 wAAAw
DegU_2 TAAwd
Binding Sites: aprE_2
comK_5
sacX_1
sipS_1
sipT
wapA_1
wapA_2
Related annotations: PaperBLAST

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