Transcription Factor

Accessions: 4egz_B (3D-footprint 20231221)
Names: Arabinose metabolism transcriptional repressor, ARAR_BACSU
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P96711
Length: 83
Pfam Domains: 19-82 Bacterial regulatory proteins, gntR family
46-80 DeoR-like helix-turn-helix domain
46-77 HTH domain
Sequence:
(in bold interface residues)
1 HHLEVLFQGPLGSEFMLPKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIR 60
61 KAIGDLVSQGLLYSVQGGGTFVA
Interface Residues: 20, 44, 45, 46, 49, 55, 56, 57, 58, 59, 60, 61, 76, 77
3D-footprint Homologues: 7zla_B, 6wg7_G, 4wwc_B, 4h0e_A, 4p9u_F, 4u0y_B, 1h9t_B, 6za3_B
Binding Motifs: 4egz_AB aTGTnnATnnACA
4egz_B TnnACAT
Binding Sites: 4egz_T
4egz_U
Publications: Jain D, Nair D.T. Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators. Nucleic acids research 41:639-47 (2013). [Pubmed]
Related annotations: PaperBLAST

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