Transcription Factor
| Accessions: | Q9M9H7 (JASPAR 2024) |
| Names: | Carboxypeptidase SOL1, EC 3.4.17.-, Protein SUPPRESSOR OF LLP1 1, SOL1_ARATH |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9M9H7 |
| Length: | 491 |
| Pfam Domains: | 72-329 Zinc carboxypeptidase 156-191 Protein of unknown function (DUF2817) |
| Sequence: (in bold interface residues) | 1 MSKLRFFQSLLISTVICFFLPSINARGGHSDHIHPGDGNYSFHGIVRHLFAQEEPTPSLE 60 61 LTRGYMTNDDLEKAMKDFTKRCSKISRLYSIGKSVNGFPLWVIEISDRPGEIEAEPAFKY 120 121 IGNVHGDEPVGRELLLRLANWICDNYKKDPLAQMIVENVHLHIMPSLNPDGFSIRKRNNA 180 181 NNVDLNRDFPDQFFPFNDDLNLRQPETKAIMTWLRDIRFTASATLHGGALVANFPWDGTE 240 241 DKRKYYYACPDDETFRFLARIYSKSHRNMSLSKEFEEGITNGASWYPIYGGMQDWNYIYG 300 301 GCFELTLEISDNKWPKASELSTIWDYNRKSMLNLVASLVKTGVHGRIFSLDKGKPLPGLV 360 361 VVKGINYTVKAHQTYADYHRLLVPGQKYEVTASSPGYKSKTTTVWLGENAVTADFILIPE 420 421 TSSRGNQLRSSCDCSCKSCGQPLLTQFFTETNNGITLTLFVVVVFLCFLLQRRVRFNLWK 480 481 QRQSSRRSITV |
| Interface Residues: | 68 |
| 3D-footprint Homologues: | 6a5n_A |
| Binding Motifs: | MA1379.1 wTwwAAAATTYAAAw |
| Binding Sites: | MA1379.1.4 MA1379.1.2 MA1379.1.5 MA1379.1.1 MA1379.1.10 MA1379.1.11 MA1379.1.12 MA1379.1.13 MA1379.1.14 MA1379.1.15 MA1379.1.16 MA1379.1.17 MA1379.1.18 MA1379.1.19 MA1379.1.20 MA1379.1.3 MA1379.1.6 MA1379.1.7 MA1379.1.8 MA1379.1.9 |
| Publications: | Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.