Transcription Factor
| Accessions: | Q24248 (JASPAR 2024) |
| Names: | ARA_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q24248 |
| Length: | 717 |
| Pfam Domains: | 258-315 Homeobox domain 273-312 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 MAAYTQFGYGGFPSASQLLPPSVQTTEDASANVNVNVNEALVMTNAPAMSPTGGQDCQGS 60 61 QPSGGAGGDASSGALSPNALSQNSNAATVVGAGGGSSAGGGGPADLATGGSLDGNGVGTT 120 121 PTAGGAGGGGSCCENGRPIMTDPVSGQTVCSCQYDSARLALSSYSRLPAASVGVYGTPYP 180 181 STDQNPYQSIGVDSSAFYSPLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDPMSAYG 240 241 GLLVSNSSYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT 300 301 QVSTWFANARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKEDLEPSKGSQGSVSLAKD 360 361 ETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGHPGGYHPYHHQHP 420 421 AYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLADTVGCKTPP 480 481 PAYMGHQSMPLQQQQQQQQQQQQAQHQYPPSEAGRDQQLFNGAAAPYLRPHTTAYGGFLG 540 541 ATTQQLHTTNNSIPYSNMPPQQQQPQQQQQQLQQGGTIHTTGSSSGPIIPLQFHNRHPQQ 600 601 QQQLQQQSQSTASQRAMGFLEAQPDTPPQTPPNMKVLSGALSLLPTATQVPMTATCRSSN 660 661 AFGFPASGYPMNFSARLGEYSPRDDYSSGNSSSSSSSSPQLQRNEAMFKPLFKKFTN |
| Interface Residues: | 258, 259, 260, 261, 262, 266, 300, 301, 303, 304, 307, 308, 309, 311, 312, 314, 315 |
| 3D-footprint Homologues: | 6fqp_B, 6m3d_C, 3a01_E, 4cyc_A, 5hod_A, 3cmy_A, 1fjl_B, 5jlw_D, 3d1n_M, 2hdd_A, 2r5y_A, 1puf_B, 1ig7_A, 5zjt_E, 2hos_A, 1nk2_P, 2lkx_A, 2ld5_A, 4xrs_G, 3rkq_B, 2h1k_B, 5flv_I, 2d5v_B, 1k61_B, 1o4x_A, 1du0_A, 1le8_B, 6fqq_E, 4xrm_B, 1puf_A, 1mnm_C, 1b72_A, 7psx_B |
| Binding Motifs: | MA0210.1 wwACA |
| Binding Sites: | MA0210.1.1 MA0210.1.10 MA0210.1.11 MA0210.1.12 / MA0210.1.16 MA0210.1.13 MA0210.1.14 MA0210.1.15 MA0210.1.17 MA0210.1.18 MA0210.1.19 MA0210.1.2 MA0210.1.20 MA0210.1.3 MA0210.1.4 MA0210.1.5 MA0210.1.6 MA0210.1.7 MA0210.1.8 MA0210.1.9 |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.