Transcription Factor
| Accessions: | ZNF35 (humanC2H2ZF-ChIP Feb2015) |
| Names: | ENSG00000169981, P13682, ZNF35 |
| Organisms: | Homo sapiens |
| Libraries: | humanC2H2ZF-ChIP Feb2015 1 1 Najafabadi HS, Mnaimneh S, Schmitges FW, Garton M, Lam KN, Yang A, Albu M, Weirauch MT, Radovani E, Kim PM, Greenblatt J, Frey BJ, Hughes TR. C2H2 zinc finger proteins greatly expand the human regulatory lexicon. Nat Biotechnol 33:555-62 (2015). [Pubmed] |
| Notes: | TF family: C2H2 experiment: ChIP-seq/MEME/B1H-RC |
| Length: | 527 |
| Pfam Domains: | 215-232 Zinc-finger double domain 221-242 C2H2-type zinc finger 222-244 C2H2-type zinc finger 222-244 Zinc finger, C2H2 type 236-259 Zinc-finger double domain 250-272 Zinc finger, C2H2 type 250-268 C2H2-type zinc finger 264-289 Zinc-finger double domain 278-300 C2H2-type zinc finger 278-300 Zinc finger, C2H2 type 278-298 C2H2-type zinc finger 292-317 Zinc-finger double domain 305-328 C2H2-type zinc finger 306-328 C2H2-type zinc finger 306-328 Zinc finger, C2H2 type 321-345 Zinc-finger double domain 334-356 C2H2-type zinc finger 334-356 Zinc finger, C2H2 type 334-354 C2H2-type zinc finger 348-373 Zinc-finger double domain 362-384 Zinc finger, C2H2 type 362-384 C2H2-type zinc finger 362-384 C2H2-type zinc finger 376-401 Zinc-finger double domain 389-410 C2H2-type zinc finger 390-412 Zinc finger, C2H2 type 390-412 C2H2-type zinc finger 405-428 Zinc-finger double domain 418-440 Zinc finger, C2H2 type 418-438 C2H2-type zinc finger 418-440 C2H2-type zinc finger 435-457 Zinc-finger double domain 446-468 C2H2-type zinc finger 446-468 Zinc finger, C2H2 type 446-460 C2H2-type zinc finger 461-484 Zinc-finger double domain 473-496 C2H2-type zinc finger 474-496 C2H2-type zinc finger 474-496 Zinc finger, C2H2 type 488-511 Zinc-finger double domain 502-524 C2H2-type zinc finger 502-524 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MTAELREAMALAPWGPVKVKKEEEEEENFPGQASSQQVHSENIKVWAPVQGLQTGLDGSE 60 61 EEEKGQNISWDMAVVLKATQEAPAASTLGSYSLPGTLAKSEILETHGTMNFLGAETKNLQ 120 121 LLVPKTEICEEAEKPLIISERIQKADPQGPELGEACEKGNMLKRQRIKREKKDFRQVIVN 180 181 DCHLPESFKEEENQKCKKSGGKYSLNSGAVKNPKTQLGQKPFTCSVCGKGFSQSANLVVH 240 241 QRIHTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCSKCGKAFTQSSNLTVHQKIH 300 301 SLEKTFKCNECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEK 360 361 PFACNDCGKAFTQSANLIVHQRSHTGEKPYECKECGKAFSCFSHLIVHQRIHTAEKPYDC 420 421 SECGKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYTCNECG 480 481 KAFRQRSSLTVHQRTHTGEKPYECEKCGAAFISNSHLMRHHRTHLVE |
| Interface Residues: | 211, 222, 232, 233, 234, 235, 236, 239, 243, 260, 261, 262, 263, 264, 266, 267, 288, 289, 290, 291, 292, 294, 295, 299, 316, 317, 318, 319, 320, 322, 323, 344, 345, 346, 347, 348, 350, 351, 353, 354, 357, 372, 373, 374, 375, 376, 379, 383, 400, 401, 402, 403, 404, 405, 407, 410, 428, 429, 430, 431, 432, 434, 435, 438, 441, 455, 456, 457, 458, 459, 460, 462, 463, 467, 484, 485, 486, 487, 488, 491, 492, 513, 514, 515, 516, 517, 519, 520 |
| 3D-footprint Homologues: | 1ubd_C, 2kmk_A, 6jnm_A, 1llm_D, 5kkq_D, 1f2i_J, 5k5i_A, 8ssq_A, 7w1m_H, 5und_A, 1g2f_F, 8ssu_A, 4x9j_A, 6e94_A, 6a57_A, 6u9q_A, 7txc_E, 5yj3_D, 6ml4_A, 5yel_A, 7n5w_A, 8gn3_A, 2drp_D, 6wmi_A, 5v3j_F, 8h9h_G, 7eyi_G, 7ysf_A, 8cuc_F, 7y3l_A, 2i13_A, 6blw_A, 1mey_C, 2gli_A, 5k5l_F, 7y3m_I, 2jpa_A, 1tf3_A, 2wbs_A, 5kl3_A, 1tf6_A, 5ei9_F, 2lt7_A, 3uk3_C, 4m9v_C |
| Binding Motifs: | ZNF35_ChIP ATATRTAAAGAG |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.