Transcription Factor
| Accessions: | Q9W1H7 (JASPAR 2024) |
| Names: | Putative homeodomain protein, Q9W1H7_DROME, RT01102p |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9W1H7 |
| Length: | 220 |
| Pfam Domains: | 113-169 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MEFSLLNKANFDKDCLYTANSEFYNSGANGGGLSVANHINHYNLMIDSSYKLCANESAIR 60 61 GSLNQESSLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFT 120 121 SNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKD 180 181 KSSKLDGRKNPVAGSKYLGPSLKGPQNGHGRQMKCLYDQI |
| Interface Residues: | 73, 74, 76, 78, 79, 113, 114, 115, 116, 154, 155, 157, 158, 161, 162, 165, 166, 169, 202, 204, 207, 209, 212, 214, 216 |
| 3D-footprint Homologues: | 6en8_C, 1puf_A, 2h1k_B, 1fjl_B, 6a8r_A, 3cmy_A, 1ig7_A, 3d1n_M, 5zfz_A, 1jgg_B, 6m3d_C, 3lnq_A, 2lkx_A, 1nk2_P, 1zq3_P, 2ld5_A, 6es3_K, 5flv_I, 3l1p_A, 5zjt_E, 4j19_B, 3a01_E, 1au7_A, 5hod_A, 1puf_B, 2hdd_A, 7psx_B, 1b72_A, 5jlw_D, 3rkq_B, 2r5y_A, 4xrs_G, 2hos_A, 7q3o_C, 4cyc_A, 7xrc_C, 1e3o_C, 1le8_A, 2xsd_C, 8g87_X, 4qtr_D, 1o4x_A, 1du0_A, 2ezv_A |
| Binding Motifs: | MA0457.1 yTAATTa MA0457.2 yTAATT |
| Binding Sites: | MA0457.1.16 MA0457.1.4 MA0457.1.17 MA0457.1.1 MA0457.1.10 MA0457.1.11 MA0457.1.12 MA0457.1.13 MA0457.1.14 MA0457.1.15 MA0457.1.18 MA0457.1.19 MA0457.1.2 MA0457.1.3 MA0457.1.5 MA0457.1.6 MA0457.1.7 MA0457.1.8 MA0457.1.9 MA0457.2.15 MA0457.2.3 MA0457.2.14 / MA0457.2.16 MA0457.2.1 MA0457.2.10 MA0457.2.11 MA0457.2.12 MA0457.2.13 MA0457.2.17 MA0457.2.18 MA0457.2.19 MA0457.2.2 MA0457.2.4 / MA0457.2.8 MA0457.2.5 MA0457.2.6 MA0457.2.7 MA0457.2.9 |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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