Transcription Factor
| Accessions: | br-PL (FlyZincFinger 1.0 ) |
| Names: | CG11491 |
| Organisms: | Drosophila melanogaster |
| Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
| Notes: | family:Cys2His2 zinc finger |
| Length: | 305 |
| Pfam Domains: | 9-31 C2H2-type zinc finger 9-20 C2H2-type zinc finger 37-61 C2H2-type zinc finger 38-57 C2H2-type zinc finger 97-120 C2H2-type zinc finger 128-150 Zinc finger, C2H2 type 129-151 C2H2-type zinc finger 129-146 C2H2-type zinc finger 185-208 C2H2-type zinc finger 216-238 Zinc finger, C2H2 type 217-234 C2H2-type zinc finger 217-239 C2H2-type zinc finger 249-272 C2H2-type zinc finger 249-270 Zinc finger, C2H2 type 279-302 C2H2-type zinc finger 279-303 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 SGGINEPQECPYCRRTFSCYYSLKRHFQDKHEQSDTLYVCEFCHRRYRTKNSLTTHKSLQ 60 61 HRGSSGMLKRSLLSSVRAQDVAQANRLLLPLPLNACHRCDVCGKLLSTKLTLKRHKEQQH 120 121 LQPLNNAVCNLCHKVFRTLNSLNNHKSIYHRRQKNHHSYFHHGAGVSQAGSPGSRLHQSS 180 181 GGDDFRCNPCNKNLSSLTRLKRHIQNVHMRPTKEPVCNICKRVYSSLNSLRNHKSIYHRN 240 241 LKQPKKKLFSCQLCGKLLCSKASLKRHIADKHAVRQEEYRCAICERVYCSRNSLMTHIYT 300 301 YHKSR |
| Interface Residues: | 18, 19, 20, 21, 22, 24, 25, 49, 51, 52, 54, 55, 69, 107, 108, 109, 110, 111, 113, 114, 115, 116, 120, 137, 138, 140, 141, 142, 144, 145, 167, 168, 170, 173, 177, 195, 196, 197, 198, 199, 200, 201, 202, 203, 206, 207, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 259, 260, 261, 262, 263, 266, 289, 290, 291, 292, 293, 296 |
| 3D-footprint Homologues: | 3uk3_C, 2drp_D, 8gh6_A, 5v3j_F, 7w1m_H, 6e94_A, 1llm_D, 4m9v_C, 5yel_A, 1g2f_F, 7n5w_A, 5ei9_F, 8ssq_A, 5k5i_A, 8ssu_A, 5kkq_D, 4x9j_A, 1mey_C, 5und_A, 8h9h_G, 7eyi_G, 2i13_A, 6wmi_A, 8cuc_F, 6ml4_A, 6u9q_A, 2kmk_A, 2lt7_A, 7y3m_I, 7ysf_A, 7y3l_A, 1f2i_J, 8gn3_A, 7txc_E, 5yj3_D |
| Binding Motifs: | br-PA_SANGER_5_FBgn0000210 RATAGTk br-PA_SOLEXA_FBgn0000210 mACTATykrkttkkt br-PE_SANGER_5_FBgn0000210 rTyCrwCTAAyG br-PE_SOLEXA_FBgn0000210 rgCrTTAGAwrrttk br-PL_SANGER_5_FBgn0000210 mmtAGAsCA br-PL_SOLEXA_FBgn0000210 krTCTAkkwkb |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.