Transcription Factor

						

			
Accessions: ABF1 (Athamap 20091028)

			
Names: ABF1
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 765
Pfam Domains:    73-171 TCP family transcription factor
  685-732 Basic region leucine zipper
  686-737 bZIP transcription factor
Sequence: 
(in bold interface residues)		   1 MEAQAQDKAEEGEEEGTRQQHAQAGPVGAAGGGGGGGAAAVAMSAIPMNSWLVPKPEPVE   60
  61 FFGGMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQ  120
 121 QSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPT  180
 181 RAVAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPA  240
 241 TGSPAVAGGNRMIPQATAVWMVPRPAGAAGAGNQPTQFWAIQSAPQLVNFAGAQFPTAIN  300
 301 VADFQQQQQQQPVSTTIVQNSNSGEHMHFSGADSHEQQRRGRKEGNSGGVVDHPEEDEDD  360
 361 DDDEPVSDSSPEEMGTHIDINNLGGDTSRGNESKPLARQSSLYSLTFDELQSTLGEPGKD  420
 421 FGSMNMDELLKNIWTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKT  480
 481 VDEVWKYLNSKEGSNGNTGTDALERQQTLGEMTLEDFLLRAGVVKEDNTQQNENSSSGFY  540
 541 ANNGAAGLEFGFGQPNQNSISFNGNNSSMIMNQAPGLGLKVGGTMQQQQQPHQQQLQQPH  600
 601 QRLPPTIFPKQANVTFAAPVNMVNRGLFETSADGPANSNMGGAGGTVTATSPGTSSAENN  660
 661 TWSSPVPYVFGRGRRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLK  720
 721 LVNQDLQKKQAEIMKTHNSELKEFSKQPPLLAKRQCLRRTLTGPW
Interface Residues: 77, 78, 79, 88, 90, 670, 671, 674, 675, 687, 690, 691, 693, 694, 695, 697, 698, 701, 702
3D-footprint Homologues: 7vp2_B, 7vp3_D, 5i50_B, 6mg1_B, 7x5e_F, 2wt7_A, 1dh3_C, 5t01_B, 2dgc_A, 5vpe_C
Binding Motifs: ABF1 ACACGTGGC
			
Publications: Choi H., Hong J., Ha J., Kang J., Kim S. Y. ABFs, a family of ABA-responsive element binding factors. J. Biol. Chem. 275:1723-1730 (2000). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.