Transcription Factor
| Accessions: | Q9NR55 (JASPAR 2024) |
| Names: | 21 kDa small nuclear factor isolated from T-cells, B-ATF-3, Basic leucine zipper transcriptional factor ATF-like 3, BATF3_HUMAN, Jun dimerization protein p21SNFT |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9NR55 |
| Length: | 127 |
| Pfam Domains: | 33-93 bZIP transcription factor 34-87 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA 60 61 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP 120 121 VAGCLPR |
| Interface Residues: | 41, 42, 44, 45, 46, 48, 49, 50, 52, 53, 54, 56, 58 |
| 3D-footprint Homologues: | 1skn_P, 6mg1_B, 7x5e_F, 1nwq_C, 5t2h_A, 5vpe_D, 2c9l_Z, 5t01_B |
| Binding Motifs: | MA0835.1 TGATGACGTCATCr MA0835.2 waTGACTCAtw MA0835.3 TGACTCA |
| Binding Sites: | MA0835.3.14 / MA0835.3.19 / MA0835.3.2 / MA0835.3.20 / MA0835.3.5 / MA0835.3.6 / MA0835.3.7 / MA0835.3.8 / MA0835.3.9 MA0835.3.12 MA0835.3.10 / MA0835.3.17 MA0835.3.13 / MA0835.3.18 MA0835.3.11 / MA0835.3.16 MA0835.3.15 / MA0835.3.3 MA0835.2.1 / MA0835.2.2 MA0835.2.10 / MA0835.2.9 MA0835.2.10 / MA0835.2.11 MA0835.2.11 / MA0835.2.12 MA0835.2.12 / MA0835.2.13 MA0835.2.13 / MA0835.2.14 / MA0835.2.18 / MA0835.2.19 MA0835.2.14 / MA0835.2.15 / MA0835.2.19 / MA0835.2.20 MA0835.2.15 / MA0835.2.16 MA0835.2.16 / MA0835.2.17 MA0835.2.17 / MA0835.2.18 MA0835.2.2 / MA0835.2.3 MA0835.2.3 / MA0835.2.4 MA0835.2.4 / MA0835.2.5 MA0835.2.5 MA0835.2.6 MA0835.2.7 MA0835.2.8 MA0835.2.9 MA0835.2.1 MA0835.2.20 MA0835.3.1 MA0835.3.4 |
| Publications: | Hai T., Liu F., Coukos W. J., Green M. R. Transcription factor ATF cDNA clones: an extensive family of leucine zipper proteins able to selectively form DNA-binding heterodimers. Genes Dev. 3:2083-2090 (1989). [Pubmed] Schleussner N, Merkel O, Costanza M, Liang HC, Hummel F, Romagnani C, Durek P, Anagnostopoulos I, Hummel M, Jöhrens K, Niedobitek A, Griffin PR, Piva R, Sczakiel HL, Woessmann W, Damm-Welk C, Hinze C, Stoiber D, Gillissen B, Turner SD, Kaergel E, von Hoff L, Grau M, Lenz G, Dörken B, Scheidereit C, Kenner L, Janz M, Mathas S. The AP-1-BATF and -BATF3 module is essential for growth, survival and TH17/ILC3 skewing of anaplastic large cell lymphoma. Leukemia 32:1994-2007 (2018). [Pubmed] |
| Related annotations: | PaperBLAST |
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