Transcription Factor

						

			
Accessions: MYB.PH3 (Athamap 20091028), Q02994 (JASPAR 2024)

			
Names: MYB.PH3, Q02994_PETHY
Organisms: Petunia, Petunia x hybrida
Libraries: Athamap 20091028 1, JASPAR 2024 2
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 517
Pfam Domains:     30-77 Myb-like DNA-binding domain
    33-91 Myb-like DNA-binding domain
   83-126 Myb-like DNA-binding domain
   86-131 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MAPDDRGMKNGGASTGRSNGAGSSRQVLKKGPWTAAEDSILMEYVKKHGEGNWNAVQRNS   60
  61 GLMRCGKSCRLRWANHLRPNLKKGAFTVEEERIIIELHAKLGNKWARMAAQLPGRTDNEI  120
 121 KNYWNTRLKRRQRAGLPIYPQELQQQNQHENNNQPHSLLSSSYDPQNSTNYNSPSLSLLD  180
 181 IFNPSTMKPSITQQFPINTPSLCLPSTNNNNIFRNTPKGLSLTLPSSMRNSQFSSLPNNN  240
 241 FTQGLSSNSIQLPPFQHNYPNFNINRPFTGISSNPNGLICGMGINTINYPSGQSSMPVTA  300
 301 SSSENTGSDFGSSDNANNYANTNGLSRGNSGLLEDLLEESQTLNRPGMKIEDNFLDLKED  360
 361 QEADYKGKSMLWEDYGLVEDAEEAILTEESAYSFAHGVDHVAQNKNSESSSPHSPPNSSS  420
 421 GIFMKKEDSFHGTNQADDDIMCLLDNFPLAVPVPEWYEDEDDKNNCNGQSSNVTNCDHIA  480
 481 ENQAEDSKSPALTLNSGTRNHDWEFGGCCWNNMPSFC
Interface Residues: 30, 65, 66, 67, 68, 70, 71, 74, 75, 76, 117, 118, 121, 122, 125, 126, 127
3D-footprint Homologues: 3osg_A, 1vfc_A, 1w0t_A, 2kdz_A, 7xur_A, 5eyb_B, 6kks_A, 1mse_C, 3zqc_A
Binding Motifs: MYB.PH3(1) wwaAAACsGTTAy
MYB.PH3(2) arrAGTTAGTTAs
MA0054.1 wAACcGTTw
Binding Sites: MA0054.1.1
MA0054.1.10
MA0054.1.11
MA0054.1.12
MA0054.1.13
MA0054.1.14
MA0054.1.15
MA0054.1.16
MA0054.1.17
MA0054.1.18
MA0054.1.19
MA0054.1.2
MA0054.1.20
MA0054.1.3
MA0054.1.4
MA0054.1.5
MA0054.1.6
MA0054.1.7
MA0054.1.8
MA0054.1.9
			
Publications: Solano R., Nieto C., Avila J., Canas L., Diaz I., Paz-Ares J. Dual DNA binding specificity of a petal epidermis-specific MYB transcription factor (MYB.Ph3) from Petunia hybrida. EMBO J. 14:1773-1784 (1995). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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