Transcription Factor
| Accessions: | T102767_1.02 (CISBP 1.02) |
| Names: | 3681.m00016, T102767_1.02; |
| Organisms: | Tetrahymena thermophila |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 943 |
| Sequence: (in bold interface residues) | 1 MIPLQAGYQNSPIDSQYADGLDQKNLFQSDQKNIYSQYNNPHNNNQHTLNTKIVNDSRVD 60 61 DISRIRNPNQMGIPENSLQYKGATNHLIKLDTEDIFNSAIKQIKNQLTSYDTPSDSKYFQ 120 121 SGVQIPNNDYPQGKKLMFLNQQSTPSEHEKNADAYNVDVKAKQEDKQILEAKEADTQYFS 180 181 CITKKELFTNDTSECDVKNTVSHFTSNLKKEISFDPKYSVIASSQNALQKQQSAIAVNGA 240 241 DKYQSHQQNSQHSSRSNTSNQNSKAILGEQHPNQKQLSAAEQANTNKQHLKRQATNATSS 300 301 SSHHNPYYYNGSSSGNMNYHHSSHSYHNPGSSSLVSTSHRGYSNSSLQQQQYQNSSSTQS 360 361 INATSNNSNNSNYSYYPNHPSSQQPMYPPHGPVSHHHLPPIYPQDDMDYGYTDMYGYYYP 420 421 YHQMPPIGEGTDSKKYEGEGSEPSEILESEEYKKYYYGHGPSSYGYYSIPPTTNTQNNTQ 480 481 AGGVSQTSPLAPTKCEANTSAENAISMVPPPQNSEYIHQQEKYDHSPYMRGYYDPKGYYP 540 541 PHSYYYPPMNEMHVGNPYQQTKKNSKKTSSSNNYHSHISLPHYPSAKGQNSTGSFSKYEQ 600 601 GQDMYLHPIEPSYNSYGMHPHHSSGIYCDSSYYAQNQLQQKSSSLNYKKPNHQSQCDKEN 660 661 IQNKSNSQSSKENHQLSKEKNDQKNNKEIQKIASSNLSNSHNSKKHSQNQLLNEQGDNND 720 721 CDQLDNQESSLQNQSTSHEIRKRKRKNNDQLKILKIEYQKGGFWGKEKILEVAQITGLSE 780 781 SQVYKWCWDQKKKRLETFKKKLGTKMLAGQEYQYEDMSGEGMEDESYKQTGSPEKLLKLN 840 841 DATGIVPIKTNISKLSNDFTINQLQEKVLANKNRALQNITDKVLSKQNSKQSNLPANIKL 900 901 EKQQSLKLSSQEGAQQNQENINPENTSQQLDDVSKRLQFSSAY |
| Interface Residues: | 742, 743, 781, 782, 785, 788, 789, 792, 793, 796 |
| 3D-footprint Homologues: | 2ld5_A, 5zfz_A, 6a8r_A, 7psx_B |
| Binding Motifs: | M1216_1.02 htttcgaaad |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.