Transcription Factor
| Accessions: | SigK (DBTBS 1.0) |
| Names: | E8VDS6_BACST, SigK |
| Organisms: | Bacillus subtilis |
| Libraries: | DBTBS 1.0 1 1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed] |
| Uniprot: | E8VDS6 |
| Length: | 155 |
| Pfam Domains: | 54-114 Sigma-70 region 2 |
| Sequence: (in bold interface residues) | 1 MTGVFAALGFVVKELVFLVSYVKNNAFPQPLSSSEEKKYLELMAKGDEHARNMLIEHNLR 60 61 LVAHIVKKFENTGEDAEDLISIGTIGLIKGIESYSAGKGTKLATYAARCIENEIVITKGG 120 121 CIHPSLIRFNIYGVRIHNGNFFHDKVNNCFFIFKS |
| Interface Residues: | 45, 86, 90, 94 |
| 3D-footprint Homologues: | 3mx4_D, 4lup_A |
| Binding Motifs: | SigK_1 mACm SigK_2 CATAyGmTr |
| Binding Sites: | cgeA_6 cgeC_2 cotA_1 cotB_3 cotC_3 cotD_3 cotE_2 cotF_1 cotG_2 cotH_2 cotM_2 cotSA cotT_1 cotV_2 cotX_3 cotY_3 cwlC cwlH_2 ftsY_3 gerE_1 gerPA_1 spoIVCB_4 spoVFA spoVK_2 spsA sspG_3 tgl yabG ydgB_2 yfhP_1 yfhP_2 yfnE_2 yfnH yhcO_2 yhjR_1 yitB yitC_2 yjcB yjcC yjcZ_2 ykuD ylbD yndL yngK yoaN_1 yobW yodH yozR_1 ypqA_2 yrkC ysnD_1 ytlA yxeE |
| Related annotations: | PaperBLAST |
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