Transcription Factor

						

			
Accessions: T090072_1.02 (CISBP 1.02)

			
Names: AAEL012091, T090072_1.02;
Organisms: Aedes aegypti
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Homeodomain
Length: 661
Pfam Domains:   255-321 Homeobox domain
  556-613 Homeobox domain
Sequence: 
(in bold interface residues)		   1 MRLKAKSLPLHCVVESVSSLQATLNFDARSPWKRRPNIETDSYVIIPAATPFCDIVTTAL   60
  61 QRLGYSSEISNAARGSISIKNWKALSLDAISDNPLVSVNDILGELTSVVTLKITILRSKP  120
 121 TQLAEIKDKLLKLLILQSHAVLRSTGCPLDEITLSQICRSPLQNTFPFTPEITDEVRRKF  180
 181 DQWWSNQLAPQPNPIAHKILPFANAQPNELDFSNFNMHDSRPDSLIDRATNPHHNLVVHP  240
 241 ALQTVHSQYPNQKTRMRTSFDPEMELPKLQRWFQENPHPSRQQIQSYVVQLNSLESRRGR  300
 301 KPLDVNNVVYWFKNARAAQKRAEMRQGMTNGYGNPNMMLSQPDYMKSSPSAPSEDIDNLS  360
 361 QDEMDDDMDRPISPQLPLSLTIHERNRPLTPTEDTPIKQENIPACSSPPPSPPPTNNLNS  420
 421 SNNNANESANDSISQNEAPKSNYSNERSNSPQRSRSPASEDLDMDEPEGSTIDDYRSPSP  480
 481 DSKRNLPFPINNPMFSHSIMYMSHYIPAMQANAAGMHLKSELSPNNHAALGQAGLNLSFN  540
 541 SDERRKRNRTFIDPVTEVPKLEQWFSMNTHPSHNLILKYTEDLNRMPYRQKFPRLESKNV  600
 601 QFWFKNRRAKCKRLKMSLYDPAQLASLGEQAHLANLHESSHMAQLHEASQLHQFHHGGDR  660
 661 D
Interface Residues: 212, 216, 254, 255, 257, 310, 313, 314, 317, 318, 537, 541, 549, 601, 602, 605, 606, 609, 610, 613
3D-footprint Homologues: 3l1p_A, 3d1n_M, 2lkx_A, 6wig_A, 4j19_B, 1e3o_C, 1au7_A, 6ryd_F, 1ig7_A, 7q3o_C, 5flv_I, 5hod_A, 1o4x_A, 3lnq_A, 6es3_K
Binding Motifs: M0837_1.02 sytwATccv
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.