Transcription Factor
| Accessions: | CEBPG (HT-SELEX2 May2017) |
| Names: | CEBPG, ENSG00000153879 |
| Organisms: | Homo sapiens |
| Libraries: | HT-SELEX2 May2017 1 1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
| Notes: | TF family: bZIP experiment: HT-SELEX Hamming distance: 1 cycle: 3, TF family: bZIP experiment: HT-SELEX Hamming distance: 1 cycle: 4, TF family: bZIP experiment: Methyl-HT-SELEX Hamming distance: 1 cycle: 3, TF family: bZIP experiment: Methyl-HT-SELEX Hamming distance: 1 cycle: 4 |
| Length: | 105 |
| Pfam Domains: | 22-74 Basic region leucine zipper 25-80 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 GGGKAVAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEE 60 61 NERLEAKIKLLTKELSVLKDLFLEHAHNLADNVQSISTENTTADG |
| Interface Residues: | 28, 29, 32, 33, 35, 36, 39, 40 |
| 3D-footprint Homologues: | 2wt7_A, 6mg1_B, 1nwq_C, 2c9l_Z |
| Binding Motifs: | CEBPG_2 brTTGCGyMAyg CEBPG_4 crTTGCGymAyg CEBPG_methyl_1 trTTGCGyAAyr CEBPG_methyl_3 brTTGCGymAyg |
| Related annotations: | PaperBLAST |
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