Transcription Factor
| Accessions: | Q02516 (JASPAR 2024) |
| Names: | HAP5_YEAST |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 242 |
| Pfam Domains: | 154-223 Core histone H2A/H2B/H3/H4 159-222 Histone-like transcription factor (CBF/NF-Y) and archaeal histone |
| Sequence: (in bold interface residues) | 1 MTDRNFSPQQGQGPQESLPEGPQPSTMIQREEMNMPRQYSEQQQLQENEGEGENTRLPVS 60 61 EEEFRMVQELQAIQAGHDQANLPPSGRGSLEGEDNGNSDGADGEMDEDDEEYDVFRNVGQ 120 121 GLVGHYKEIMIRYWQELINEIESTNEPGSEHQDDFKSHSLPFARIRKVMKTDEDVKMISA 180 181 EAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKSDMFDFLIDVVPRRPL 240 241 PQ |
| Interface Residues: | 163, 166, 170, 177, 212 |
| 3D-footprint Homologues: | 6r2v_C, 7cvo_A, 5o9g_G, 7d69_G, 6k1k_C, 7lyb_G, 6t7a_C, 5gt0_C, 7e9c_G, 6pwe_G, 7lyc_G, 6yov_C, 7jzv_N, 6px1_C, 1kx5_G, 7wlr_G, 6iy2_G, 7lya_G, 3x1t_G |
| Binding Motifs: | MA0316.1 tssgmkCTsATTGGy MA0316.2 ssgmkCTsATTGGy |
| Publications: | Pachkov M, Erb I, Molina N, van Nimwegen E. SwissRegulon: a database of genome-wide annotations of regulatory sites. Nucleic acids research 35:D127-31 (2007). [Pubmed] |
| Related annotations: | PaperBLAST |
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