Transcription Factor
| Accessions: | T018425_1.02 (CISBP 1.02) |
| Names: | hlh-10, T018425_1.02; |
| Organisms: | Caenorhabditis elegans |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:bHLH |
| Length: | 170 |
| Pfam Domains: | 90-140 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MQVMESCGMFLQQNLFAWFLQSMLEASASQPQLTQDEPPENDTKENDLVKQNKSEVNDEN 60 61 ESTPSPTQNSRRRTSTGKIDRRMVGKMCTRRYEANARERNRVQQLSKMFDQLRVCLPIED 120 121 DAKISKLATLKVASSYIGYLGAILQENSNDEEEFKKQLQVELECAKTLRK |
| Interface Residues: | 69, 91, 94, 95, 97, 98, 101, 102 |
| 3D-footprint Homologues: | 7obn_A, 2ypa_A, 5eyo_A, 5i50_B, 2ql2_D, 5gnj_I |
| Binding Motifs: | M0249_1.02 CATATATG |
| Related annotations: | PaperBLAST |
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