Transcription Factor
| Accessions: | EREBP1 (EEADannot 2023-12-22) |
| Names: | EREBP1, ERF1_ORYSJ, Ethylene-responsive transcription factor 1, OsEREBP1, Q6K7E6, Q9SE28 |
| Organisms: | Oryza sativa |
| Libraries: | EEADannot 2023-12-22 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:AP2/ERF |
| Length: | 366 |
| Pfam Domains: | 119-168 AP2 domain |
| Sequence: (in bold interface residues) | 1 MCGGAIIHHLKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEF 60 61 EVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQF 120 121 RGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPT 180 181 TAQKRRAGSTTAKAPKSSVEQKPTVKPAFNNLANANAFVYPSANFTSNKPFVQPDNMPFV 240 241 PAMNSAAPIEDPIINSDQGSNSFGCSDFGWENDTKTPDITSIAPISTIAEVDESAFIKSS 300 301 TNPMVPPVMENSAVDLPDLEPYMRFLLDDGAGDSIDSLLNLDGSQDVVSNMDLWSFDDMP 360 361 VSDFY* |
| Interface Residues: | 124, 126, 127, 128, 132, 134, 136, 141, 143, 145, 272, 280, 281, 282, 283, 285, 307 |
| 3D-footprint Homologues: | 1gcc_A, 7wq5_A, 5wx9_A, 7et4_D, 7bzg_B |
| Binding Motifs: | EEAD0001 AGCmGsC |
| Binding Sites: | EREBP1_1 EREBP1_2 |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.