Transcription Factor

Accessions: Q9LEZ3 (JASPAR 2024)
Names: AtbHLH46, Basic helix-loop-helix protein 46, BES1-interacting Myc-like protein 1, bHLH 46, bHLH transcription factor bHLH046, BIM1_ARATH, Transcription factor BIM1, Transcription factor EN 126
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q9LEZ3
Length: 529
Pfam Domains: 278-327 Helix-loop-helix DNA-binding domain
Sequence:
(in bold interface residues)
1 MELPQPRPFKTQGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLECVGA 60
61 KEDVSRINSTTTASEKPPPPAPPPPLQHVLPGGIGTYTISPIPYFHHHHQRIPKPELSPP 120
121 MMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMRADVA 180
181 ATVGQWPVAERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDDLDDEE 240
241 DFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRFQMLR 300
301 QLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSNNNQQLVP 360
361 EGVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTSPFPLSIQSNSFFSPVIAGNPVP 420
421 QFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLT 480
481 KASISVEIELAKQSSSSSFKDHEVREPVSRTRNDNVKQTRKPKRLKTGQ
Interface Residues: 278, 280, 281, 282, 284, 285, 288, 289, 310, 312
3D-footprint Homologues: 7z5k_B, 1an4_A, 7rcu_E, 5eyo_A, 6g1l_A, 7ssa_L, 5gnj_I, 7d8t_A, 4h10_A, 5i50_B, 7f2f_B, 4h10_B, 8osl_O, 5nj8_D, 1am9_A, 8osl_P
Binding Motifs: MA0964.1 bcaCGTGmyv
MA0964.2 wrTCACGTGAyw
MA0964.3 TCACGTGA
Binding Sites: MA0964.3.14 / MA0964.3.18
MA0964.3.12 / MA0964.3.20
MA0964.3.15 / MA0964.3.2 / MA0964.3.3
MA0964.3.10 / MA0964.3.5 / MA0964.3.6 / MA0964.3.7 / MA0964.3.8 / MA0964.3.9
MA0964.1.1
MA0964.1.10
MA0964.1.11
MA0964.1.12
MA0964.1.13
MA0964.1.14
MA0964.1.15
MA0964.1.16
MA0964.1.17
MA0964.1.18
MA0964.1.19 / MA0964.1.20
MA0964.1.2
MA0964.1.3
MA0964.1.4
MA0964.1.5
MA0964.1.6
MA0964.1.7
MA0964.1.8
MA0964.1.9
MA0964.2.1
MA0964.2.10
MA0964.2.11
MA0964.2.12
MA0964.2.13
MA0964.2.14
MA0964.2.15
MA0964.2.16
MA0964.2.17
MA0964.2.18
MA0964.2.19
MA0964.2.2
MA0964.2.20
MA0964.2.3
MA0964.2.4
MA0964.2.5
MA0964.2.6
MA0964.2.7
MA0964.2.8
MA0964.2.9
MA0964.3.1 / MA0964.3.16 / MA0964.3.4
MA0964.3.11 / MA0964.3.19
MA0964.3.13 / MA0964.3.17
Publications: Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120:249-59 (2005). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.