Transcription Factor
| Accessions: | CEBPB (HT-SELEX2 May2017) |
| Names: | CEBPB, ENSG00000172216 |
| Organisms: | Homo sapiens |
| Libraries: | HT-SELEX2 May2017 1 1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
| Notes: | TF family: bZIP experiment: HT-SELEX Hamming distance: 1 cycle: 3, TF family: bZIP experiment: Methyl-HT-SELEX Hamming distance: 1 cycle: 3 |
| Length: | 92 |
| Pfam Domains: | 17-70 Basic region leucine zipper 18-76 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 PAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERL 60 61 QKKVEQLSRELSTLRNLFKQLPEPLLASSGHC |
| Interface Residues: | 25, 28, 29, 31, 32, 35, 36 |
| 3D-footprint Homologues: | 6mg1_B, 1nwq_C, 2c9l_Z, 2dgc_A |
| Binding Motifs: | CEBPB_2 brTTGCGyAAyr CEBPB_methyl_1 yrTTGCGyAAyr |
| Related annotations: | PaperBLAST |
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