Transcription Factor

Accessions: SigM (DBTBS 1.0)
Names: SigM, SIGM_BACSU
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Uniprot: O07582
Length: 163
Pfam Domains: 6-72 Sigma-70 region 2
105-152 Sigma-70, region 4
106-154 Sigma-70, region 4
Sequence:
(in bold interface residues)
1 MTIDEIYQMYMNDVYRFLLSMTKDKHLAEDLLQETFMRAYIHIHSYDHSKVKPWLFQVAR 60
61 NAFIDYVRKHKKEVTISDDLIGSLFQNAVQSPAHQVEIKEVLTGYMSELPDNYREALTLY 120
121 YLKELNYKEASHIMNISEANFKSVLFRARQRLKALYNRGVNDE
Interface Residues: 38, 42, 46, 48, 49, 52, 53, 54, 56, 57, 58, 61, 65, 127, 140, 142, 143, 146, 147
3D-footprint Homologues: 4lup_A, 6jhe_A, 2h27_A
Binding Motifs: SigM AAAkTTkC
Binding Sites: sigM_2
yjbD_3
ywoA_1
Related annotations: PaperBLAST

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