Transcription Factor
| Accessions: | SigE (DBTBS 1.0) |
| Names: | P31, RNA polymerase sigma-E factor, RPSE_BACSU, SigE, Sigma-29, Stage II sporulation protein GB |
| Organisms: | Bacillus subtilis |
| Libraries: | DBTBS 1.0 1 1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed] |
| Uniprot: | P06222 |
| Length: | 239 |
| Pfam Domains: | 62-131 Sigma-70 region 2 180-233 Sigma-70, region 4 204-226 Helix-turn-helix |
| Sequence: (in bold interface residues) | 1 MKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMKLPNGDQAARA 60 61 ILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVNTFNPEKKIKLATYASRCIEN 120 121 EILMYLRRNNKIRSEVSFDEPLNIDWDGNELLLSDVLGTDDDIITKDIEANVDKKLLKKA 180 181 LEQLNEREKQIMELRFGLVGEEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV |
| Interface Residues: | 94, 98, 102, 103, 105, 106, 111, 112, 113, 115, 116, 117, 120, 124, 206, 207, 216, 217, 218, 219, 221, 222 |
| 3D-footprint Homologues: | 4lup_A, 6ido_B, 3n97_A, 6lty_B, 8cyf_B |
| Binding Motifs: | SigE_1 kcaTrwy SigE_2 CATACRhT |
| Binding Sites: | asnO_1 bofA_1 cotE_1 cotJA_1 ctaA_4 cwlD cwlJ dacB gerM_1 glgB mmgA_2 nucB phoB_4 phoP_10 prkA safA spoIID_1 spoIIIAA_1 spoIIIAG spoIIM_1 spoIIP_1 spoIVA_1 spoIVA_2 spoIVCA_1 spoIVCB_3 spoIVFA_1 spoVB_1 spoVD_1 spoVE_1 spoVE_2 spoVID spoVK_1 spoVM_1 spoVR usd yaaH yabP_1 ybaN_1 ycgF_1 ydcA ydcC yfhS yfnE_1 yhaX yhbH_1 yhcO_1 yitC_1 yjbX yjcA yjmC yknT ykvI ykvU_1 ylbJ_1 yngJ yoaW_1 ypjB_1 ypqA_1 yqfC_1 yqfZ_1 yteV ytrH ytvI ytxC yunB yuzC ywdL yxjC_2 yyaD yybI |
| Related annotations: | PaperBLAST |
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