Transcription Factor

Accessions: 3swm_B (3D-footprint 20231221), 3swm_D (3D-footprint 20231221), 3swp_B (3D-footprint 20231221), 3swp_D (3D-footprint 20231221)
Names: Abscisic-acid-responsive NAC, ANAC019, NAC domain-containing protein 19, NAC19_ARATH
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q9C932
Length: 140
Pfam Domains: 7-124 No apical meristem (NAM) protein
Sequence:
(in bold interface residues)
1 PLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGE 60
61 KEWYFFSPRDPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMH 120
121 EYRLIEPSDDWVLCRIYKKQ
Interface Residues: 72, 81, 83, 85, 105, 109, 110, 111, 114
3D-footprint Homologues: 3swp_A, 7xp3_B
Binding Motifs: 3swm_ABD TGCnTGnnnnnnaCGCAA
3swm_B CAnGCA
3swp_ABCD CgnTTCnAnnnCGAAG
Binding Sites: 3swm_E
3swm_F
3swp_E
3swp_F
Publications: Welner D.H, Lindemose S, Grossmann J.G, Møllegaard N.E, Olsen A.N, Helgstrand C, Skriver K, Lo Leggio L. DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. The Biochemical journal 444:395-404 (2012). [Pubmed]
Related annotations: PaperBLAST

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