Transcription Factor
Accessions: | ComK (DBTBS 1.0) |
Names: | ComK, E8VHF1_BACST |
Organisms: | Bacillus subtilis |
Libraries: | DBTBS 1.0 1 1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed] |
Uniprot: | E8VHF1 |
Length: | 317 |
Pfam Domains: | 27-317 Basic membrane protein |
Sequence: (in bold interface residues) | 1 MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNV 60 61 DVYYKEGVKTEEDIINAIEDFHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAK 120 121 ADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQPEVDGFIKGAKYENPDIEVN 180 181 TKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL 240 241 GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRI 300 301 AKLIKTYNKTGELPKNE |
Interface Residues: | 8, 9, 12, 298, 299, 302, 303, 305, 306 |
3D-footprint Homologues: | 5vvr_M, 8ee9_F |
Binding Motifs: | ComK_1 AAAA ComK_2 TTTT |
Binding Sites: | addB_1 addB_2 comC_1 comC_2 comEA_1 comEA_2 comFA_1 comFA_2 comGA_1 comGA_2 comK_3 comK_4 cspB_1 nucA_1 nucA_2 radC_1 radC_2 rapH_1 recA_1 recA_2 recA_3 recA_4 rok_1 rok_2 smf_1 smf_2 thdF_1 thdF_2 ybdK_1 ybdK_2 yhjB_1 yhjB_2 yneB_1 yneB_2 yvrP_1 yvrP_2 ywpH_1 ywpH_2 yyaF_1 yyaF_2 |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.