Transcription Factor

Accessions: A1Z916 (JASPAR 2024)
Names: A1Z916_DROME, Achintya, isoform C, Achintya, isoform D
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: A1Z916
Length: 555
Pfam Domains: 94-150 Homeobox domain
111-150 Homeobox KN domain
Sequence:
(in bold interface residues)
1 MISPEQEEVNMVLDRHVRQNIQDMMHEAHVQASLLENEGRGRFHSDSSLDQDSLHADVIV 60
61 EEDQSTEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGNLPKTSVKILKRWLYEHRYNAY 120
121 PSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISRRGKKVSPNCS 180
181 RSSALGANLTGPNPAHGSPASEVVVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMV 240
241 KMEPEYEDSVIYSWQQAIANNPMGFQSLHSSLQATMIDKIKNYQMRKAAAIGGSAVGSGG 300
301 AGGSSSNSSPATSILPYSLFGQLPPEFDDEEKPRPPKRVRTRTVAAKSPRENAKQAKQKT 360
361 GNKQETMYCYKDSYGGIVVSPRSEGEESAQGYESCGPNSEEEVRFETSHDWQSVIKTVFG 420
421 TEEVSTSAGNNPGTSGSKGSVQNTAIWNRNQTAKRDVNQQLTDFESELNRIQASEIQTID 480
481 PTNSNQQDIGDNLQADEVFTGAEAEAGQSQLSAMSQGTSPDERAKYKCLYYLVETAMAVR 540
541 QNDDVQDDDFVYMGD
Interface Residues: 94, 95, 96, 97, 98, 99, 138, 139, 141, 142, 145, 146, 147, 149, 150
3D-footprint Homologues: 1puf_A, 6fqp_B, 1zq3_P, 2ld5_A, 1puf_B, 1au7_A, 1mnm_C, 1k61_B, 1le8_A, 1le8_B, 6fqq_E, 4xrm_B, 2d5v_B, 5zjt_E, 2hos_A
Binding Motifs: MA0207.1 TGACAG
Binding Sites: MA0207.1.1
MA0207.1.10
MA0207.1.11
MA0207.1.12
MA0207.1.13
MA0207.1.14
MA0207.1.15
MA0207.1.16
MA0207.1.17
MA0207.1.18
MA0207.1.19
MA0207.1.2
MA0207.1.20
MA0207.1.3
MA0207.1.4
MA0207.1.5
MA0207.1.6
MA0207.1.7
MA0207.1.8
MA0207.1.9
Publications: Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.