Transcription Factor

Accessions: BC11A_HUMAN (HOCOMOCO 10)
Names: B-cell CLL/lymphoma 11A, B-cell lymphoma/leukemia 11A, BC11A_HUMAN, BCL-11A, COUP-TF-interacting protein 1, Ecotropic viral integration site 9 protein homolog, EVI-9, Zinc finger protein 856
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Uniprot: Q9H165
Length: 835
Pfam Domains: 46-72 C2H2-type zinc finger
378-399 Zinc finger, C2H2 type
379-399 C2H2-type zinc finger
379-399 C2H2-type zinc finger
391-415 Zinc-finger double domain
405-427 C2H2-type zinc finger
743-764 C2H2-type zinc finger
743-764 Zinc finger, C2H2 type
744-764 C2H2-type zinc finger
756-780 Zinc-finger double domain
770-792 Zinc finger, C2H2 type
770-792 C2H2-type zinc finger
785-809 Zinc-finger double domain
799-821 C2H2-type zinc finger
800-823 Zinc finger, C2H2 type
800-823 C2H2-type zinc finger
Sequence:
(in bold interface residues)
1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI 60
61 LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI 120
121 CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT 180
181 SAWFLLQHAQNTHGLRIYLESEHGSPLTPRVGIPSGLGAECPSQPPLHGIHIADNNPFNL 240
241 LRIPGSVSREASGLAEGRFPPTPPLFSPPPRHHLDPHRIERLGAEEMALATHHPSAFDRV 300
301 LRLNPMAMEPPAMDFSRRLRELAGNTSSPPLSPGRPSPMQRLLQPFQPGSKPPFLATPPL 360
361 PPLQSAPPPSQPPVKSKSCEFCGKTFKFQSNLVVHRRSHTGEKPYKCNLCDHACTQASKL 420
421 KRHMKTHMHKSSPMTVKSDDGLSTASSPEPGTSDLVGSASSALKSVVAKFKSENDPNLIP 480
481 ENGDEEEEEDDEEEEEEEEEEEEELTESERVDYGFGLSLEAARHHENSSRGAVVGVGDES 540
541 RALPDVMQGMVLSSMQHFSEAFHQVLGEKHKRGHLAEAEGHRDTCDEDSVAGESDRIDDG 600
601 TVNGRGCSPGESASGGLSKKLLLGSPSSLSPFSKRIKLEKEFDLPPAAMPNTENVYSQWL 660
661 AGYAASRQLKDPFLSFGDSRQSPFASSSEHSSENGSLRFSTPPGELDGGISGRSGTGSGG 720
721 STPHISGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACA 780
781 QSSKLTRHMKTHGQVGKDVYKCEICKMPFSVYSTLEKHMKKWHSDRVLNNDIKTE
Interface Residues: 387, 388, 389, 390, 391, 394, 395, 416, 418, 419, 420, 422, 423, 426, 706, 717, 718, 719, 720, 726, 728, 731, 752, 753, 754, 755, 756, 758, 759, 761, 762, 765, 780, 781, 782, 783, 784, 786, 787, 810, 811, 812, 813, 814, 815, 816, 817, 821
3D-footprint Homologues: 8cuc_F, 7y3l_A, 2gli_A, 8gn3_A, 4m9v_C, 7y3m_I, 1tf6_A, 2kmk_A, 7eyi_G, 3uk3_C, 1tf3_A, 6jnm_A, 6ml4_A, 5v3j_F, 7n5w_A, 6blw_A, 5kkq_D, 1ubd_C, 6u9q_A, 5ei9_F, 1mey_C, 5kl3_A, 7ysf_A, 1f2i_J, 6wmi_A, 8ssq_A, 7w1m_H, 5und_A, 1g2f_F, 5k5l_F, 8ssu_A, 4x9j_A, 1llm_D, 8h9h_G, 6e94_A, 2lt7_A, 2i13_A, 6a57_A, 2jpa_A, 2wbs_A, 5yel_A, 7txc_E, 2drp_D, 5yj3_D, 5k5i_A
Binding Motifs: BC11A_HUMAN.H10MO.C|M01032 raaagrGGAAgtGrrar
Related annotations: PaperBLAST

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