Transcription Factor
Accessions: | BC11A_HUMAN (HOCOMOCO 10) |
Names: | B-cell CLL/lymphoma 11A, B-cell lymphoma/leukemia 11A, BC11A_HUMAN, BCL-11A, COUP-TF-interacting protein 1, Ecotropic viral integration site 9 protein homolog, EVI-9, Zinc finger protein 856 |
Organisms: | Homo sapiens |
Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
Uniprot: | Q9H165 |
Length: | 835 |
Pfam Domains: | 46-72 C2H2-type zinc finger 378-399 Zinc finger, C2H2 type 379-399 C2H2-type zinc finger 379-399 C2H2-type zinc finger 391-415 Zinc-finger double domain 405-427 C2H2-type zinc finger 743-764 C2H2-type zinc finger 743-764 Zinc finger, C2H2 type 744-764 C2H2-type zinc finger 756-780 Zinc-finger double domain 770-792 Zinc finger, C2H2 type 770-792 C2H2-type zinc finger 785-809 Zinc-finger double domain 799-821 C2H2-type zinc finger 800-823 Zinc finger, C2H2 type 800-823 C2H2-type zinc finger |
Sequence: (in bold interface residues) | 1 MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDI 60 61 LIFIEHKRKQCNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGI 120 121 CPKQEHIADKLLHWRGLSSPRSAHGALIPTPGMSAEYAPQGICKDEPSSYTCTTCKQPFT 180 181 SAWFLLQHAQNTHGLRIYLESEHGSPLTPRVGIPSGLGAECPSQPPLHGIHIADNNPFNL 240 241 LRIPGSVSREASGLAEGRFPPTPPLFSPPPRHHLDPHRIERLGAEEMALATHHPSAFDRV 300 301 LRLNPMAMEPPAMDFSRRLRELAGNTSSPPLSPGRPSPMQRLLQPFQPGSKPPFLATPPL 360 361 PPLQSAPPPSQPPVKSKSCEFCGKTFKFQSNLVVHRRSHTGEKPYKCNLCDHACTQASKL 420 421 KRHMKTHMHKSSPMTVKSDDGLSTASSPEPGTSDLVGSASSALKSVVAKFKSENDPNLIP 480 481 ENGDEEEEEDDEEEEEEEEEEEEELTESERVDYGFGLSLEAARHHENSSRGAVVGVGDES 540 541 RALPDVMQGMVLSSMQHFSEAFHQVLGEKHKRGHLAEAEGHRDTCDEDSVAGESDRIDDG 600 601 TVNGRGCSPGESASGGLSKKLLLGSPSSLSPFSKRIKLEKEFDLPPAAMPNTENVYSQWL 660 661 AGYAASRQLKDPFLSFGDSRQSPFASSSEHSSENGSLRFSTPPGELDGGISGRSGTGSGG 720 721 STPHISGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACA 780 781 QSSKLTRHMKTHGQVGKDVYKCEICKMPFSVYSTLEKHMKKWHSDRVLNNDIKTE |
Interface Residues: | 387, 388, 389, 390, 391, 394, 395, 416, 418, 419, 420, 422, 423, 426, 706, 717, 718, 719, 720, 726, 728, 731, 752, 753, 754, 755, 756, 758, 759, 761, 762, 765, 780, 781, 782, 783, 784, 786, 787, 810, 811, 812, 813, 814, 815, 816, 817, 821 |
3D-footprint Homologues: | 8cuc_F, 7y3l_A, 2gli_A, 8gn3_A, 4m9v_C, 7y3m_I, 1tf6_A, 2kmk_A, 7eyi_G, 3uk3_C, 1tf3_A, 6jnm_A, 6ml4_A, 5v3j_F, 7n5w_A, 6blw_A, 5kkq_D, 1ubd_C, 6u9q_A, 5ei9_F, 1mey_C, 5kl3_A, 7ysf_A, 1f2i_J, 6wmi_A, 8ssq_A, 7w1m_H, 5und_A, 1g2f_F, 5k5l_F, 8ssu_A, 4x9j_A, 1llm_D, 8h9h_G, 6e94_A, 2lt7_A, 2i13_A, 6a57_A, 2jpa_A, 2wbs_A, 5yel_A, 7txc_E, 2drp_D, 5yj3_D, 5k5i_A |
Binding Motifs: | BC11A_HUMAN.H10MO.C|M01032 raaagrGGAAgtGrrar |
Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.