Transcription Factor

Accessions: Q8NDY6 (JASPAR 2024)
Names: BHE23_HUMAN, bHLHb4, bHLHe23, Class B basic helix-loop-helix protein 4, Class E basic helix-loop-helix protein 23
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q8NDY6
Length: 225
Pfam Domains: 102-152 Helix-loop-helix DNA-binding domain
Sequence:
(in bold interface residues)
1 MAELKSLSGDAYLALSHGYAAAAAGLAYGAAREPEAARGYGTPGPGGDLPAAPAPRAPAQ 60
61 AAESSGEQSGDEDDAFEQRRRRRGPGSAADGRRRPREQRSLRLSINARERRRMHDLNDAL 120
121 DGLRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALDEMRRLVAFLNQGQGLAAPVNA 180
181 APLTPFGQATVCPFSAGAALGPCPDKCAAFSGTPSALCKHCHEKP
Interface Residues: 102, 105, 106, 108, 109, 110, 112, 113
3D-footprint Homologues: 2ypa_A, 6od3_F, 2ypa_B, 7d8t_A, 2ql2_A, 2ql2_D, 6g1l_A, 4h10_A, 8osl_P
Binding Motifs: MA0817.1 aAmCATATGkTw
MA0817.2 AmCATATGkT
Publications: Atchley WR, Fitch WM. A natural classification of the basic helix-loop-helix class of transcription factors. Proc Natl Acad Sci U S A 94:5172-6 (1997). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.