Transcription Factor
Accessions: | AtMYB1 (AthaMYB 1.0) |
Names: | At3g09230, AtMYB1, ATMYB1 protein, F3L24.10 protein, Myb domain protein 1, MYB transcription factor |
Organisms: | Arabidopsis thaliana |
Libraries: | AthaMYB 1.0 1 1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed] |
Uniprot: | Q42575 |
Length: | 394 |
Pfam Domains: | 55-100 Myb-like DNA-binding domain 58-117 Myb-like DNA-binding domain 107-150 Myb-like DNA-binding domain 110-156 Myb-like DNA-binding domain |
Sequence: (in bold interface residues) | 1 MEAEIVRRSEVTGLRREVEESSIGRGDCDGDGGDVGEDAAGFVGTSGRGRRDRVKGPWSK 60 61 EEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFTEVEDQAIIA 120 121 AHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRRFIDFEKAKNIGTGSLVVDDSGFDRT 180 181 TTVASSEETLSSGGGCHVTTPIVSPEGKEATTSMEMSEEQCVEKTNGEGISRQDDKDPPT 240 241 LFRPVPRLSSFNACNHMEGSPSPHIQDQNQLQSSKQDAAMLRLLEGAYSERFVPQTCGGG 300 301 CCSNNPDGSFQQESLLGPEFVDYLDSPTFPSSELAAIATEIGSLAWLRSGLESSSVRVME 360 361 DAVGRLRPQGSRGHRDHYLVSEQGTNITNVLST* |
Interface Residues: | 55, 89, 90, 91, 92, 94, 95, 98, 99, 100, 141, 142, 145, 146, 149, 150, 151, 290, 324, 327, 329, 331, 333, 335, 336 |
3D-footprint Homologues: | 3osg_A, 1vfc_A, 2kdz_A, 7xur_A, 7c4r_A, 3zqc_A, 5eyb_B, 6kks_A, 1mse_C, 2qsh_A |
Binding Motifs: | AtMYB1_I wamaGTTr AtMYB1_II AGGTTA |
Binding Sites: | AAAAGTTA ACAAGTTA AGGTTA GTCAGTTA TACTGTTG TGCGGTTG |
Publications: | Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed] |
Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.