Transcription Factor
| Accessions: | ci (FlyZincFinger 1.0 ) |
| Names: | CG2125 |
| Organisms: | Drosophila melanogaster |
| Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
| Notes: | family:Cys2His2 zinc finger |
| Length: | 189 |
| Pfam Domains: | 51-78 Zinc finger, C2H2 type 71-96 Zinc-finger double domain 84-108 C2H2-type zinc finger 84-108 Zinc finger, C2H2 type 100-127 Zinc-finger double domain 114-139 C2H2-type zinc finger 114-139 Zinc finger, C2H2 type 133-157 Zinc-finger double domain 145-170 C2H2-type zinc finger 145-170 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 ANADTTDIKDEPGDFIETNCHWRSCRIEFITQDELVKHINNDHIQTNKKAFVCRWEDCTR 60 61 GEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTGEKPYTCEYPG 120 121 CSKAFSNASDRAKHQNRTHSNEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKH 180 181 KGLPLNDAN |
| Interface Residues: | 61, 63, 64, 66, 67, 68, 69, 70, 72, 73, 75, 76, 79, 96, 97, 98, 99, 100, 101, 102, 103, 104, 115, 126, 127, 128, 129, 130, 131, 132, 133, 134, 137, 158, 159, 160, 161, 163, 164 |
| 3D-footprint Homologues: | 5yel_A, 3uk3_C, 1tf3_A, 6jnm_A, 8cuc_F, 7y3l_A, 7n5w_A, 1ubd_C, 5ei9_F, 2kmk_A, 8ssq_A, 5v3j_F, 2gli_A, 5kkq_D, 8ssu_A, 1tf6_A, 6ml4_A, 5kl3_A, 8h9h_G, 7eyi_G, 6e94_A, 6wmi_A, 6a57_A, 5k5i_A, 2i13_A, 2jpa_A, 7w1m_H, 6u9q_A, 5yj3_D, 1mey_C, 7txc_E, 5und_A, 1f2i_J, 1g2f_F, 6blw_A, 4x9j_A, 1llm_D, 4m9v_C, 7y3m_I, 7ysf_A, 2lt7_A, 8gn3_A, 6dg0_A, 2wbs_A, 2drp_D |
| Binding Motifs: | ci_SOLEXA_FBgn0004859 GaCCACCCAcrdm |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.