Transcription Factor
| Accessions: | Q8BKX7 (JASPAR 2024) |
| Names: | Another partner for ARF 1, Zinc finger protein 410, Zinc finger protein APA-1, ZN410_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q8BKX7 |
| Length: | 478 |
| Pfam Domains: | 220-243 Zinc finger, C2H2 type 235-261 Zinc-finger double domain 249-273 Zinc finger, C2H2 type 266-292 Zinc-finger double domain 279-303 Zinc finger, C2H2 type 281-303 C2H2-type zinc finger 295-321 Zinc-finger double domain 311-333 Zinc finger, C2H2 type 311-333 C2H2-type zinc finger 325-349 Zinc-finger double domain 339-362 C2H2-type zinc finger 339-361 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MLSDELESKPELLVQFVQNTSIPLGQGLVESEAKDITCLSLLPVTEASECSRLMLPDETP 60 61 NHANSSKEVPSSAVLRSLQVNVGPDGEETRAQTVQKSPEFLTTPESPSLLQDLQPSDSTS 120 121 FILLNLTRAGLGSSAEHFVFVQDETEDSGADFLSAESTDSSIPWFLRVQELAHDSLIAAT 180 181 RAQLAKNAKTGSNGENVHLGSGDGQPKDSGPLPQAEKKLKCTVEGCDRTFVWPAHFKYHL 240 241 KTHRNERSFICPAEGCGKSFYVLQRLKVHMRTHNGEKPFMCHESGCGKQFTTAGNLKNHR 300 301 RIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVHSGEKPHQCQVCGKTFSQSGSRNVHMRK 360 361 HHLQLGTTGSQEQDQTAEPLMGSSLLEDASVPNKNLVSMNSQSSLGGESLNLSNTNSILG 420 421 VDDEVLTERASRPLSSVPDVTHHLVTMQSGRQSYEVSVLTAVNPQELLNQGDLTERQT |
| Interface Residues: | 231, 232, 234, 235, 238, 261, 262, 263, 264, 265, 267, 268, 270, 271, 274, 291, 292, 293, 294, 295, 296, 297, 298, 299, 301, 302, 321, 322, 323, 324, 325, 326, 327, 328, 329, 350, 351, 352, 353, 354, 355, 356, 357, 360 |
| 3D-footprint Homologues: | 5v3j_F, 1tf6_A, 6wmi_A, 2i13_A, 1ubd_C, 7w1m_H, 6jnm_A, 8cuc_F, 1tf3_A, 7y3l_A, 7n5w_A, 5kkq_D, 5yel_A, 7txc_E, 5kl3_A, 5ei9_F, 8ssq_A, 8ssu_A, 6ml4_A, 2gli_A, 7eyi_G, 7y3m_I, 6e94_A, 7ysf_A, 6a57_A, 2lt7_A, 2jpa_A, 6u9q_A, 4x9j_A, 5yj3_D, 1mey_C, 5und_A, 2kmk_A, 1g2f_F, 6blw_A, 8h9h_G, 4m9v_C, 3uk3_C, 1llm_D, 2wbs_A, 2drp_D, 1f2i_J, 5k5i_A, 8gn3_A |
| Binding Motifs: | PB0098.1 drkwATGGGATGkmdwm PB0202.1 yymyyCCkCCCCwhayw |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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