Transcription Factor
| Accessions: | DAG2 (ArabidopsisPBM 20140210), DOF5.7 (ArabidopsisPBM 20140210), Q9LSL6 (JASPAR 2024) |
| Names: | AtDOF5.7, Dof zinc finger protein DOF5.7, DOF57_ARATH |
| Organisms: | Arabidopsis thaliana |
| Libraries: | ArabidopsisPBM 20140210 1, JASPAR 2024 2 1 Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | Zn finger (C2C2-DOF) |
| Length: | 316 |
| Pfam Domains: | 37-96 Dof domain, zinc finger |
| Sequence: (in bold interface residues) | 1 MSSHTNLPSPKPVPKPDHRISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYS 60 61 LSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPNSSMNTLPSSSSSQRFFSSIM 120 121 EDSSKFFPPPTTMDFQLAGLSLNKMNDLQLLNNQEVLDLRPMMSSGRENTPVDVGSGLSL 180 181 MGFGDFNNNHSPTGFTTAGASDGNLASSIETLSCLNQDLHWRLQQQRMAMLFGNSKEETV 240 241 VVERPQPILYRNLEIVNSSSPSSPTKKGDNQTEWYFGNNSDNEGVISNNANTGGGGSEWN 300 301 NGIQAWTDLNHYNALP |
| Interface Residues: | 69, 72, 76, 77, 143, 144, 145, 146, 148, 149 |
| 3D-footprint Homologues: | 1kb2_B, 7q94_B |
| Binding Motifs: | DAG2 sAwAARGTgr DOF5.7 raAAArrggr DOF5.7_2 awCGTTAACg MA0984.1 aAAArrgg MA0984.2 AAArr |
| Publications: | Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.